Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00374 ATGATTGCCCGATTAACGCTTGGATCACCTTCGCGTCCAAAACATCCCGAAATTGAAGTTCCAAATCTGCAAGTCATCAAGCTTATGCAAAGCTTCAAGTCTAGAGAATATGTTAGGGAAACTTTTGCCTGGATGCATTACTACTGGTATCTAACAAATGCTGGAATCGATTTCTTGAGAACTTACCTCAATCTCCCATCTGAAATTGTGCCTGCAACCCTGAAGAAATCTGCCAAGGCTCCTGGCAGGCCATTTGGAGGCCCTCCTGGTGATCGTCCACGTGGCCCTCCTCGCTTTGAGGGTGGCTCGAGGTTCGGTGATCGTGATGGATACCGTGGAGGTCCTAGAGGTCCCCCTGGTGAGTTTGGGGGTGAAAAGGGTGGAGCTCCTGCTGACTTCCAGCCATCATTTAGGGTAAACTTTTTTCATCCCTACATTGGTTAA 444 0.4842 MIARLTLGSPSRPKHPEIEVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNAGIDFLRTYLNLPSEIVPATLKKSAKAPGRPFGGPPGDRPRGPPRFEGGSRFGDRDGYRGGPRGPPGEFGGEKGGAPADFQPSFRVNFFHPYIG* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00374 147 Gene3D - 1 87 IPR036388 -
Pte7g00374 147 PANTHER 40S RIBOSOMAL PROTEIN S10 13 138 IPR037447 -
Pte7g00374 147 MobiDBLite consensus disorder prediction 76 135 - -
Pte7g00374 147 MobiDBLite consensus disorder prediction 97 111 - -
Pte7g00374 147 Pfam Plectin/S10 domain 11 77 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00374 Pte-Chr7 5055368 5055900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00374 14 138 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 80.315 3.18e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00374 K02947 - qsa:O6P43_008154 167.162