Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00343 ATGATTTGTAGGACGATTTCATCGGTGGAGGAGAAATCATCAAGTCTGACCCAATTGTGTCTTTCCGTGAAACTGTTCTTGAGAGATCCTATCGCACAACGTCCATTAGAAAAAGGGCTTGCGGAGGCCATTGATGATGGCTGCATTGGTCCCAGGGATGATCCCAAAAATCAGTCTAAAATCCTTGCTAAGAAGTTTGGTTGGGATAAGGATCTTGCTAAGAAAATTTGGTGTTTTGGTCCTGAGACAACGGATCCTAAGATAGTTGTTGATTTGTGCAAGGGTGTGCAGTATCTGAATGAAAGATTCAGCGGTTGCCGTGAAATTAAAGAAGGTCCTTTGGCTGAGGAAAACATGAGAGGCATATGCTTTGAAGTGTGCGATGTTGTTCTTCATGCTGATTCCATTCACATAGGAGGTCGTCAGGTCATTCCAACTACAAGAAGGATGATCTATGCATCCCAACTGACAGCTAAGCCAAGGCTTCTTGAGCCGGTGTACTTGGTGGAGATCCAGGCACCAATTAAGCTTGGATTACGCTTCAGCACGTCGTTGTTGTATCGAAAGGAACCTCCAAAGCAAATAGAGGGTTTCGGAAGAAGGAGAATTGGATTTTGTGCTGTCCACTTAGGAATTTCCACGGCTGAAACTTTAACCTTATGA 663 0.4404 MICRTISSVEEKSSSLTQLCLSVKLFLRDPIAQRPLEKGLAEAIDDGCIGPRDDPKNQSKILAKKFGWDKDLAKKIWCFGPETTDPKIVVDLCKGVQYLNERFSGCREIKEGPLAEENMRGICFEVCDVVLHADSIHIGGRQVIPTTRRMIYASQLTAKPRLLEPVYLVEIQAPIKLGLRFSTSLLYRKEPPKQIEGFGRRRIGFCAVHLGISTAETLTL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00343 220 SMART EFG_IV_2 47 159 IPR005517 GO:0005525
Pte7g00343 220 SUPERFAMILY Ribosomal protein S5 domain 2-like 34 163 IPR020568 -
Pte7g00343 220 Pfam Elongation factor G, domain IV 52 159 IPR005517 GO:0005525
Pte7g00343 220 CDD aeEF2_snRNP_like_IV 34 168 - -
Pte7g00343 220 Gene3D - 22 159 IPR014721 -
Pte7g00343 220 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 32 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00343 Pte-Chr7 4768159 4768867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00343 34 174 Eukaryotic Initiation Factors Gene Family AT1G56070 78.082 1.64e-73 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00343 K03234 - mnt:112093001 234.187