Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00328 ATGATTTGTAGGACGATTTCATCGGTGGAGGAGAAATCATCAAGTCTGACCCAATTGTGTCTTTCCGTGAAACTGTTCTTGAGAGATCCTATCGCACAGGATGATCCCAAAAATCAGTCTAAAATCCTTGCTAAGGAGTTTGGTTGGGATAAGGATCTTGCTAAGAGAATTTGGTGTTTTGGTCCTGAGACAACGGATCCTAAGATAGTTGTTGATTTGTGCAAGGGTGTGCAGTATCTGAATGAAAGATTCAGCGGTTGCCGTGAAATTAAAGAAGGTCCTTTGGCTGAGGAAAACATGAGAGGCATATGCTTTGAAGTGTGCGATGTTGTTCTTCATGCTGATTCCATTCACATAGGAGGTGGTCAGGTCATTCCAACTACAAGAAGGATGATCTATGCATCCCAACTGACAGCTAAGCCAAGGCTTCTTGAGCCGGTGTACTTGGTGGAGATCCAGGCACCAATTAAGCTTGGATTACGCTTCAGCACGTCGTTGTTGTATCGACAGGAACCTCCAAAGCAAATAGAGGGTTTCGGAAGAAGGAGAATTGGATTTTGTGCTGTCCACTTAGGAATTTCCATGGCTGAAACTTTAACCTTATGA 606 0.4356 MICRTISSVEEKSSSLTQLCLSVKLFLRDPIAQDDPKNQSKILAKEFGWDKDLAKRIWCFGPETTDPKIVVDLCKGVQYLNERFSGCREIKEGPLAEENMRGICFEVCDVVLHADSIHIGGGQVIPTTRRMIYASQLTAKPRLLEPVYLVEIQAPIKLGLRFSTSLLYRQEPPKQIEGFGRRRIGFCAVHLGISMAETLTL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00328 201 SMART EFG_IV_2 30 140 IPR005517 GO:0005525
Pte7g00328 201 CDD aeEF2_snRNP_like_IV 34 149 - -
Pte7g00328 201 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 34 157 - -
Pte7g00328 201 Pfam Elongation factor G, domain IV 34 140 IPR005517 GO:0005525
Pte7g00328 201 Gene3D - 3 140 IPR014721 -
Pte7g00328 201 SUPERFAMILY Ribosomal protein S5 domain 2-like 33 144 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00328 Pte-Chr7 4638701 4639671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00328 33 155 Eukaryotic Initiation Factors Gene Family AT1G56070 77.344 3.89e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00328 K03234 - pvy:116105855 206.068