Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00319 ATGGCACTAAGCAGACTTGGACAATTCCGAAGTATCGTCAATGAAGCATGGAATGGAGCTTTCATGGTTGCAAAGTTCTTTTGCTGTCTCCATGTTACCAACACATATGTCTGCACGGTTGCTCTTGCCGTTGGACCCAGTATGCTTCCAACCATTGGTTTAACTAGCGAGCTGCTCTTGGTTGAGAAGCTCTCTCTGCGGTTTGAAAATGTTCGTCGAGGAGATATTGTTCTTATAAGATCGCCACAAAACCCGCGAAAGATCATCACCAAACGCTTGGTTGCAATGGAGGGTGATAGTGTTAAGTACATGGTGGATCCAAAGTACAGCGACAGGTGTGAGACTGTTATGGTTCCAAAAGGACACATATGGGTACAGGGAGACAATATGTACGAATCAGTCGACTCAAGGCATTTTGGTTCTGTCCCTTATGGTCTTCTTCAAGGCAAAGCAATCTGGAGAATATGGCCGCCTAAAGTTTTTGGATCACTTGGAAAGCAAAGTTGA 507 0.4477 MALSRLGQFRSIVNEAWNGAFMVAKFFCCLHVTNTYVCTVALAVGPSMLPTIGLTSELLLVEKLSLRFENVRRGDIVLIRSPQNPRKIITKRLVAMEGDSVKYMVDPKYSDRCETVMVPKGHIWVQGDNMYESVDSRHFGSVPYGLLQGKAIWRIWPPKVFGSLGKQS* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00319 168 Gene3D Umud Fragment, subunit A 33 163 - -
Pte7g00319 168 Pfam Signal peptidase, peptidase S26 28 103 IPR019533 GO:0004252|GO:0006465
Pte7g00319 168 Pfam Signal peptidase, peptidase S26 112 156 IPR019533 GO:0004252|GO:0006465
Pte7g00319 168 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 8 166 - -
Pte7g00319 168 FunFam Inner membrane protease subunit 1 34 163 - -
Pte7g00319 168 NCBIfam signal peptidase I 26 157 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte7g00319 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte7g00319 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte7g00319 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte7g00319 168 SUPERFAMILY LexA/Signal peptidase 35 164 IPR036286 -
Pte7g00319 168 CDD S26_SPase_I 45 151 IPR019533 GO:0004252|GO:0006465
Pte7g00319 168 ProSitePatterns Signal peptidases I signature 3. 123 136 IPR019758 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00319 Pte-Chr7 4407083 4414919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00319 48 165 MADS-box Gene Family AT1G29960 50.000 5.28e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00319 K09647 - cave:132170793 232.646