Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00315 ATGGGCTTGCTCCGGAGACTATTTGGGACAAAAAAACAACCGGTGAACTCGGATGGTTCAGGTGATAAACCGGCGGCGCAAAAGAGAAGGTGGAACTTTATCAAGTCCAGCAAGGAAAATTCTCAATTGCCACCACCCTATTCCTCTCGTTTCAATGGGTTAAATAGTCCATCTACTTTTTCGTGTGTCTTCAGTGACTCATTGGATGCTAACAAGCATGCCATAGCAGTGGCCGCAGCAACTGCAGCGGTGGCAGAGGCGGCACTTGCAGCTGCACATGCTGCGGCTGAAGTGGTCAGGCTCACAAACGGAACCGGTGGTGCGAGAAGTGGCTCCTCTGAGCATGTTAGCAACAACCAGAGGATGCTGGTTGAGATAATTGCAGCGGTGAAGATACAATCGGCGTTCAGAGGATACTTGGCAAGAAGGGCATTAAGGGCACTCAAAGCATTGGTTAAACTGCAAGCATTAGTGAAAGGTCACATAGTGCGGAAGCAAACTGCGGATATGTTCAGGAGGATGCAAACCTTGGTCAGATTGCAATCTCGTTTACGTGCAAATCGAATGCACTTGGCAGAAAATTTACATTCCAGCTTGTCTTCCTTGTCTCATTTTCCTAATGATGATTGGGAGCATTCGTACCATGGCTATGTTAGCAAACTGGAGGGGCCCTCTATACTGAAGAGGTGCAGTTCAAATTCAAGCTTTAGAGAGATCGATAGTGCAGGAGGGCATTTCAATAAGACCTGGTTGGATCGTTGGATGGAAGAAAACTTATGGATCAACCGTCGTGACACTTCATTGAAAGCTGGTCATGCAGAAGACAGTAAGAGTGACAAAATTCTGGAAGTAGATACTTGGAAACCACATTTGAACTCCCAACTGTATGATAAGTCTTCACATTCATCACTTCATGGTTTGGCTTCTGATTACAGCGGTGTGAATCTTCCATATTATAACTCTCCATCCAAATCTTCGAGAAAACAGATAAATCCAAGTGTATCTTCAAAGGAAGTTCCTGCTTTCAGTCAAAATTTTCCAAAAGGAAAAGAAGATGCAGCTTCGTGGACTGCAGAGAATATCCCTGCATTTTCTACTTCTTCTAGGCCTGGAGGTGTTGTAAGGAGAACTCCCTTCTCACCCACAAAAAGTGAGTGTTCTTGGGGTTTCTTTAATGGCTATTCTGGCTATCCAAACTACATGGCAAACACAGAATCTTCTAGGGCCAAGGCGAGATCACTGAGTGCCCCGAGACAAAGACTTGAGTGTGAGAGGTATGTTTCTACGAGGATGTCTCTGCAGGGGTCTTGGGATACCAATTTCAGAAACAAACCTTATCCAACCTCTAGTCAGTTAAACAACAGACATGGGAGTACAAATTTAAGGTGA 1389 0.45 MGLLRRLFGTKKQPVNSDGSGDKPAAQKRRWNFIKSSKENSQLPPPYSSRFNGLNSPSTFSCVFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGTGGARSGSSEHVSNNQRMLVEIIAAVKIQSAFRGYLARRALRALKALVKLQALVKGHIVRKQTADMFRRMQTLVRLQSRLRANRMHLAENLHSSLSSLSHFPNDDWEHSYHGYVSKLEGPSILKRCSSNSSFREIDSAGGHFNKTWLDRWMEENLWINRRDTSLKAGHAEDSKSDKILEVDTWKPHLNSQLYDKSSHSSLHGLASDYSGVNLPYYNSPSKSSRKQINPSVSSKEVPAFSQNFPKGKEDAASWTAENIPAFSTSSRPGGVVRRTPFSPTKSECSWGFFNGYSGYPNYMANTESSRAKARSLSAPRQRLECERYVSTRMSLQGSWDTNFRNKPYPTSSQLNNRHGSTNLR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00315 462 SMART iq_5 124 146 IPR000048 GO:0005515
Pte7g00315 462 SMART iq_5 147 168 IPR000048 GO:0005515
Pte7g00315 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 171 IPR027417 -
Pte7g00315 462 Pfam Protein of unknown function (DUF4005) 374 438 IPR025064 -
Pte7g00315 462 PANTHER IQ-DOMAIN 5-RELATED 25 434 - -
Pte7g00315 462 MobiDBLite consensus disorder prediction 437 462 - -
Pte7g00315 462 Gene3D - 126 178 - -
Pte7g00315 462 MobiDBLite consensus disorder prediction 1 27 - -
Pte7g00315 462 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Pte7g00315 462 ProSiteProfiles IQ motif profile. 128 153 IPR000048 GO:0005515
Pte7g00315 462 MobiDBLite consensus disorder prediction 322 341 - -
Pte7g00315 462 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Pte7g00315 462 Pfam IQ calmodulin-binding motif 149 166 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00315 Pte-Chr7 4338047 4341757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00315 1 437 IQD Protein Family AT5G62070 43.750 6.83e-58 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00315 - - vum:124834771 447.203