Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00312 ATGGAGGTGCATGGAGATATGGGTCTTTTTGCTGAGAATTTTGATCCTGACATGCTTGCAAGACTGAGAGATGATGAGAATCAGAGCCGATCAGGAAGTGACAACTTGGAAGGTGCTTCAGGTGAAGATCAGCAGGAAGCCGGTGGTAATGGTGGGCGACCAAGGAAGAAGGGATATCACAGACACTCTCAGCGCCAAACTCAAATTCTTGAATCTTTCTTCAAGGAGTGTCCACATCCTGATGAACATCAAAGGTTAGATCTTAGCAGGAGGCTTGGCTTGGATCCTAGGCAAATCAAGTTCTGGTTTCAGAATCGCCGAACCCAAATGAAGGCTCAATTGGAACGCCACGAGAATATAATTCTCAGACAAGAGAATGACAAGCTGCGGGCCGAAAACATACTCATGAAGGAAGCTATGAACAACCCAACATGCGACAACTGTGGGGGGCTTGCAATGCCGGGTTCAGTCTCAGTTGACGAGCACCAGCTCAAAGTGGATAATGCTCGATTGCGGGAAGAGCTGAATCGTGTATCTTCATTGGCAAACAGGTTCCTCGGAAGGAGTCTGTCATCTTTTGCCAACCCCCTTCCAATTCCAGACACCGGGGTTGCTGATTCCAACGGTGTTGGTACTTGTGCCTTGCCGATGGGCTTCGGGGTCGAGAACGGTTTCACGAGCTCTTCATCTGGATTGTCAGCAATGAAATCTCCATTGTCATGGATGAGGAATGATGAGAGATCTGTGCTACTAGATATAGCATTTAATGCCATGGATGAGCTTATGAGGCTTGCTCAAGCTGCACCTCCTCTTTGGATCAAAACTATGGATGGTGAGAAGGAATTGCTGAATCAAGTGGAATACTTGAGGAGCTTCAATTCTTGTTTCGGCGTCACACCTCCTGGTTATGTCACTGAGGCTACCAGAGACGTTGGTATGGCTTTCATCAGTAGTGCGGCACTAGTGGAGATTTTGACAGATGCAAGTCGATGGAAGGAAATGTTCAGGGACATGATTGCTGCAGCTGCCGTTGTTGACATAGTTTCAGATGGCATTAATGGATCCAAGAATGGTGCTGTACTGTTGATGCATGCTGACATGCAAGTGCTATCACCATTGATCCCCATTCGCCGATCAAGGTTTCTCCGATTCAGCAAACAGCATGCGCAGGGCTTCTGGGCTGTTGTTGATATTTCCCTTGACAATGGAAACCCATTCCCAAATTGTAGAAGGCTTCCTTCAGGCATTCTTGTGCAGGACATGCCCAATGGCTACTCCAAAGTTATTTGGATAGAGCATTCTGAGTATGATGAGCGTGCAATCCATCAACTCTACGAACCATTGGTGAGTTCTGGCATGGCCTTTGGTGCTAAGAAATGCATTGCCACCCTCCAAAGACAATGTGAAAGCTTTGTAATGCTTATGTACCCTCCAAACCCTAGTGATGATTACTCAGCAGCCATTGGCCAAGCCGGTAAGGCAAGCATGTGGAACCTTGCACAACGACTGACAGATAACTTCTGTTCGGGTATTTGTGCAACGGGCCCACATTTTTGGGAGAAAATTCCCCTTGAAAATATGGATGAAATGAGGGTGATGATTCGCCGGGATCTAGCTGACATCGGTCAGCCTGTCGGTGTACTTCTGAGTGCTGCAACTTCTGTCTGGATGCCAGTTTCGAGCCAAACACTGTTCAGTTTTCTGAGGAACGAACATCTTAGGTCTGAGTGGGACATTCTTGCAAATGATGCACCCATGGAAGAGATAATCCACATTGCTAAGGGCCAGGCTTATGGAAACTCCGTTTCCCTTCTCCGTTCTAACGCTGTGGATGGCAAGGAGAGCTCCACTCTGATACTGCAAGAGTCATGGACAGACGCCTCATCGTCACTGATAGTGTATGCTCCTGTTGATATGCAATCCATGAATGCGGTGCTGAACGGTGGAGATTCTTCCTATGTAGCTCTCTTGCCTTCAGGATTTGCAATTCATCCTGATGCTCAATCCATCTATGGAAATGGAGGACATAATGTTGGTGGAAGCCTGCTTACAGTTGGAATCCACATACTAGTCGATGACATGAGTTCATCCAAGCTAACTGATGAAACTGTTCAGACTTGCAACAGTATCATCACCGGCATGATTCAGAGAATCAAAGCTGCCCTCCCAGTGTGA 2175 0.4713 MEVHGDMGLFAENFDPDMLARLRDDENQSRSGSDNLEGASGEDQQEAGGNGGRPRKKGYHRHSQRQTQILESFFKECPHPDEHQRLDLSRRLGLDPRQIKFWFQNRRTQMKAQLERHENIILRQENDKLRAENILMKEAMNNPTCDNCGGLAMPGSVSVDEHQLKVDNARLREELNRVSSLANRFLGRSLSSFANPLPIPDTGVADSNGVGTCALPMGFGVENGFTSSSSGLSAMKSPLSWMRNDERSVLLDIAFNAMDELMRLAQAAPPLWIKTMDGEKELLNQVEYLRSFNSCFGVTPPGYVTEATRDVGMAFISSAALVEILTDASRWKEMFRDMIAAAAVVDIVSDGINGSKNGAVLLMHADMQVLSPLIPIRRSRFLRFSKQHAQGFWAVVDISLDNGNPFPNCRRLPSGILVQDMPNGYSKVIWIEHSEYDERAIHQLYEPLVSSGMAFGAKKCIATLQRQCESFVMLMYPPNPSDDYSAAIGQAGKASMWNLAQRLTDNFCSGICATGPHFWEKIPLENMDEMRVMIRRDLADIGQPVGVLLSAATSVWMPVSSQTLFSFLRNEHLRSEWDILANDAPMEEIIHIAKGQAYGNSVSLLRSNAVDGKESSTLILQESWTDASSSLIVYAPVDMQSMNAVLNGGDSSYVALLPSGFAIHPDAQSIYGNGGHNVGGSLLTVGIHILVDDMSSSKLTDETVQTCNSIITGMIQRIKAALPV* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00312 724 Gene3D - 42 128 - -
Pte7g00312 724 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 55 722 IPR042160 -
Pte7g00312 724 SMART HOX_1 55 117 IPR001356 GO:0003677
Pte7g00312 724 SUPERFAMILY Bet v1-like 491 693 - -
Pte7g00312 724 CDD homeodomain 56 113 IPR001356 GO:0003677
Pte7g00312 724 Pfam START domain 253 470 IPR002913 GO:0008289
Pte7g00312 724 Coils Coil 107 142 - -
Pte7g00312 724 CDD START_ArGLABRA2_like 247 469 - -
Pte7g00312 724 SMART START_1 252 470 IPR002913 GO:0008289
Pte7g00312 724 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Pte7g00312 724 Pfam Homeodomain 56 111 IPR001356 GO:0003677
Pte7g00312 724 SUPERFAMILY Bet v1-like 246 470 - -
Pte7g00312 724 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Pte7g00312 724 SUPERFAMILY Homeodomain-like 49 116 IPR009057 -
Pte7g00312 724 FunFam Homeobox-leucine zipper protein HDG1 40 129 - -
Pte7g00312 724 ProSiteProfiles START domain profile. 243 473 IPR002913 GO:0008289
Pte7g00312 724 MobiDBLite consensus disorder prediction 18 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00312 Pte-Chr7 4316122 4319400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00312 1 722 Homeobox Transcription Factor Family AT3G61150 49.868 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte7g00312 START 3.2e-41 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00312 K09338 - gmx:100794400 857.055