Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00294 ATGGAAAATTCTCATGCAAACGTGCCTCAAACTCAAAGTGACCCATCCTACTCTACAGCCACAGCGGCGGCATGGCCATCTTTTTCGAGTCAGCATCATCATCATACATCTAGGAGGCATTCAAAGTACAGAGGTATCAGATGCAGAAGTGGGAAATGGGTGTCAGAGATAAGGGAGCCACCTGCTTACGATGTCGCTGCTCTTGCATTGAAAGGGCCATACGCCCCTCTTAACTTTCCTGAATCAATACACTCCTATCCGGTACCTACTACAACTTCTGCAACCGATATAAGAAGAGCAGCATCCTTGACCTCTGAGGCTAGGCTGCGTAAACAAGCGGAAGCGGAAACTGTTGAATCGGCCACTGCCGGAGAGGAATTCATTGATGAGGATGAACTGTTGAATATGCCAAATTTGCTAGTGGATATGGCTGGTGGAATGTTAGTAAGCCCCCAAGGATAA 462 0.474 MENSHANVPQTQSDPSYSTATAAAWPSFSSQHHHHTSRRHSKYRGIRCRSGKWVSEIREPPAYDVAALALKGPYAPLNFPESIHSYPVPTTTSATDIRRAASLTSEARLRKQAEAETVESATAGEEFIDEDELLNMPNLLVDMAGGMLVSPQG* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00294 153 MobiDBLite consensus disorder prediction 1 42 - -
Pte7g00294 153 SMART rav1_2 42 86 IPR001471 GO:0003700|GO:0006355
Pte7g00294 153 MobiDBLite consensus disorder prediction 1 31 - -
Pte7g00294 153 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 13 152 IPR045277 GO:0003700
Pte7g00294 153 SUPERFAMILY DNA-binding domain 41 82 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00294 Pte-Chr7 3984490 3985006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00294 37 151 AP2-EREBP Transcription Factor Family AT5G52020 41.892 2.14e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00294 - - qsa:O6P43_008271 144.05