Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00293 ATGGCTTCTGCAACTATGGCCCTCTTTCCAATCATTAAAACTCGCTTCTATGCTGGGAAACCAATACCATGTCACTATCATCTTCGATCACATCCCTTGCAATTTCCAGGCCAACTACGCTCTAAGCTTCAGAGAAATATTTTCACTAAGGCCAAAACTATCGTTTCCCTTGCCTATGTCGGACCGGCCTGCGAACCCATTGAAAGTGACCCTGACCTTGATGGGTCGGACAAGGTTCAAGTGCAATCTCCGAGTGTCATTGGTTGGGGCCTGCTATGGAGGCTTTTGGTCAAGTACAAATTAAGGCTTGCGGTTTCGTTTTTGGCTCTCATTGGGTGCAGCAGTTGCACCCTTTCTATGCCTATATACTCCGGGAGATTTTTTGAAGTTCTCATAGGTGCAAGACCGGAACCGTTGTGGAAGTTACTGAGTACGGTGGGGGCTCTGTACGCCCTGGAGCCACTTTTAACTGTTGTTTTTGTTATAAATATGAATACCATTTGGGAGAATGTGATGTCAGCACTAAGAGCCCAGATTTTTGGGAGGATCTTGATTCAGAAGGTCGAATTTTTTGACCGCTACAAGGTTGGAGAACTTACTGGTTTGCTAACATCTGATTTGGGCTCTCTTAAAAATATTGTGAGCGAAAACATTTCAAGAGATCGTGGATTCAGGGCTCTTTCTGAGGTCGTTGGAACTATATGCATACTTTTTACTCTATCACCTCAACTTGCACCTATTCTAGGCATTCTAGTGCTTGCTGTCTCTATTTCAGTTGCTGTGTACAAGAGATCAACGGTGCCTGTTTTCATAGCCCATGGTTTGGCTCAGGCATCCATATCTGATTGTGTCACAGAGACTTTTTCTGCCATTCGTACTGTAAGATCTTTTGGAGGTGAAAAACGACAAATGCTGATGTTTGCTAATCAGGTTCTTTCTTATCAATCCAGTGGGATAAAGCTGGGAATGTTTAAATCTGTGAATGAATCCTTGACCAGACTTGCTGTATATGTTTCTCTGCTGGCATTATATTATCTTGGAGGCAATAAAGTGAAGGCTGGAGAACTTTCTGTTGGAACTGTAGCATCATTTATTGGATATACTTTCACATTAACGTTTGCGGTTCAAGGGCTTGTAAACACATTTGGTGATCTTCGTGGCACCTTTGCTGCTGTTGAGAGAATTAACTCTGTGCTTTCTGGGGTTGAGATCGATGAATCCCTTGCTTATGGTCTAGAACGAGAACTGAAACAGAAAGGAGCATATGATGACAAATATGGACTGTTTTTACCAAATGGTTATGCTGAGAAAACCCAAACCATTAACACTCATTACATGTCAGCCTTAAGATCTGACAATAATGTTGCAAGCTTGGCTTGGACTGGAGACATTTGTCTTGAAGATGTACACTTCTCTTATCCATTGCGACCAGATGTGGAAATCTTGAGCGGCTTAAATTTGACACTGAAGTGTGGCACGGTAACCGCATTGGTGGGTCCTAGTGGTGCAGGCAAGAGCACTATAGTACAGCTTTTGGCTCGCTTTTACGAGCCAACAAAAGGTCGTATAGCAGTTGGAGGAGAGGATGTCCGAACATTTGACAAGAATGAATGGGCTCGTGTTGTCTCTATAGTGAATCAAGAACCTGTTCTTTTCTCTGTGTCTGTCGGAGAAAATATTGCATATGGCCTTCCTGATGATACTGTATCCAAAGATGATGTGATTAAGGCAGCAAAGGCTGCAAATGCTCATGACTTCATAATATCACTTCCACAGGGGTATGACACACTTGTTGGTGAACGTGGAGGCTTGCTAAGTGGAGGTCAAAGGCAGAGAATTGCTATTGCCCGGGCTCTATTGAAGAATGCCCCAATTCTCATACTTGATGAGGCTACTAGTGCATTGGATGCTGTGAGTGAGCGCTTGGTCCAGGATGCTCTGGACCATTTAATGAAGGGAAGAACAACGCTGGTTATAGCTCATAGATTAAGCACAGTTCAGAATGCCGATCAAATTGCACTTTGTTCTGATGGAAAGATTGCAGAACTTGGTACTCACTTTGAATTATTGACCAGGAAGGGTCAGTATGCTTCGTTGGTAGGTACTCAACGATTGGCATTTGAGTAA 2127 0.4325 MASATMALFPIIKTRFYAGKPIPCHYHLRSHPLQFPGQLRSKLQRNIFTKAKTIVSLAYVGPACEPIESDPDLDGSDKVQVQSPSVIGWGLLWRLLVKYKLRLAVSFLALIGCSSCTLSMPIYSGRFFEVLIGARPEPLWKLLSTVGALYALEPLLTVVFVINMNTIWENVMSALRAQIFGRILIQKVEFFDRYKVGELTGLLTSDLGSLKNIVSENISRDRGFRALSEVVGTICILFTLSPQLAPILGILVLAVSISVAVYKRSTVPVFIAHGLAQASISDCVTETFSAIRTVRSFGGEKRQMLMFANQVLSYQSSGIKLGMFKSVNESLTRLAVYVSLLALYYLGGNKVKAGELSVGTVASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVLSGVEIDESLAYGLERELKQKGAYDDKYGLFLPNGYAEKTQTINTHYMSALRSDNNVASLAWTGDICLEDVHFSYPLRPDVEILSGLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPTKGRIAVGGEDVRTFDKNEWARVVSIVNQEPVLFSVSVGENIAYGLPDDTVSKDDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALDHLMKGRTTLVIAHRLSTVQNADQIALCSDGKIAELGTHFELLTRKGQYASLVGTQRLAFE* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00293 708 Pfam ABC transporter 482 633 IPR003439 GO:0005524
Pte7g00293 708 SMART AAA_5 491 685 IPR003593 GO:0016887
Pte7g00293 708 CDD ABC_MTABC3_MDL1_MDL2 464 703 - -
Pte7g00293 708 Gene3D ABC transporter type 1, transmembrane domain 90 405 IPR036640 GO:0005524|GO:0016020
Pte7g00293 708 Gene3D ABC transporter type 1, transmembrane domain 439 461 IPR036640 GO:0005524|GO:0016020
Pte7g00293 708 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 464 702 IPR003439 GO:0005524
Pte7g00293 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 453 703 IPR027417 -
Pte7g00293 708 Gene3D - 462 705 IPR027417 -
Pte7g00293 708 SUPERFAMILY ABC transporter transmembrane region 92 395 IPR036640 GO:0005524|GO:0016020
Pte7g00293 708 CDD ABC_6TM_TAP_ABCB8_10_like 107 395 - -
Pte7g00293 708 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 80 706 IPR039421 -
Pte7g00293 708 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 104 387 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte7g00293 708 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 462 706 - -
Pte7g00293 708 ProSitePatterns ABC transporters family signature. 605 619 IPR017871 GO:0005524|GO:0016887
Pte7g00293 708 Pfam ABC transporter transmembrane region 104 374 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00293 Pte-Chr7 3961707 3967885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00293 461 708 Calmodulin-binding Proteins AT2G36910 54.183 4.31e-76 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00293 K05657 - zju:107414471 1052.35