Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00281 ATGCTTCAATTTTGTTGTTTTCCATGGTTTCCTGATCAAAGTTTGGAGTACAATGAAGATTATCCTTGGGATAGATACAGTCTCAAGGATTTGCTTAATGCTACACACAATTTTCATCAAGACAACAAGATTGGAGAGGGTGGTTTTGGAAGTGTTTATTGGGGACGAACAAGTAAAGGCGTAGAGATAGCAGTGAAACGGTTAAAAGCAATGAGTGCAAAGGCAGAGATGGAATTCGCAGTAGAAGTTGAAGTACTTGGAAGGGTTAGGCATAAGAATTTGTTGGGTTTGAGAGGATTCTATGCAGGTGGAGAAGAAAGGTTAATTGTCTACGATTACATGCCTAATCACAGCCTAGTAACCCATCTTCATGGTCAACTTGCTGCTCAGTGTCTACTTGATTGGCAAAGAAGAATTAACATAGCTATTGGAGCAGCCGAAGGTTTAGCGTACTTGCACCATGAGACAAAGCCGCATATCATTCACAGAGACATAAAGGCTAGCAATGTTCTGCTAGACACCGAATTTCAACCCAAAGTTGCTGATTTTGGTTTTGCAAAGCTAATACCGGATGGTGTAACTCATATGACAACTAGGGTTAAAGGGACTCTTGGATATTTGGCTCCAGAATATGCAATGTGGGGGAAAGTTTCGGAAAGCTGTGATGTTTATAGCTTTGGGATTTTGCTTTTGGAGATGTTTAGTGCTAAGAAACCAATTGAAAAGCTGCCGGGAGGGGTAAAACGAGATATTGTCCAGTGGGTCACACCATTTGTCCAAAAGAATGCTTTTCACCTCATTGCTGATCCAAGGTTGAAGGGCAGGTTTGACCATGAACAACTCAAATCCATTGTGATTTTAGCCATGACATGCACCGATAGCAACCCAGAGAACAGGCCTAGCATGTTGGATGTTATAGACTGCCTCAAAGGTGGCTCAACAAGGAGGAGAAAAGAGATCGCATCATATGTGAAGGACTGTGGGGAAGAGGAAGAAGAACATGAAAATGATACAGACAATGAAGAATTAGGTACGATAAAATCTAACTGGGAGATGCTGTCATATGACAAATCCAAATTAAAATAA 1086 0.4107 MLQFCCFPWFPDQSLEYNEDYPWDRYSLKDLLNATHNFHQDNKIGEGGFGSVYWGRTSKGVEIAVKRLKAMSAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLVTHLHGQLAAQCLLDWQRRINIAIGAAEGLAYLHHETKPHIIHRDIKASNVLLDTEFQPKVADFGFAKLIPDGVTHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEMFSAKKPIEKLPGGVKRDIVQWVTPFVQKNAFHLIADPRLKGRFDHEQLKSIVILAMTCTDSNPENRPSMLDVIDCLKGGSTRRRKEIASYVKDCGEEEEEHENDTDNEELGTIKSNWEMLSYDKSKLK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00281 361 FunFam PTI1-like tyrosine-protein kinase At3g15890 114 324 - -
Pte7g00281 361 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 113 - -
Pte7g00281 361 Gene3D Transferase(Phosphotransferase) domain 1 114 325 - -
Pte7g00281 361 SMART serkin_6 38 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00281 361 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Pte7g00281 361 CDD STKc_IRAK 44 311 - -
Pte7g00281 361 SUPERFAMILY Protein kinase-like (PK-like) 16 309 IPR011009 -
Pte7g00281 361 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00281 361 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 340 - -
Pte7g00281 361 Gene3D Phosphorylase Kinase; domain 1 13 113 - -
Pte7g00281 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Pte7g00281 361 Pfam Protein kinase domain 38 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00281 Pte-Chr7 3834082 3836486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00281 19 311 Receptor kinase-like Gene Family AT5G45780 44.147 1.01e-80 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pte7g00281 Pkinase 4.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00281 - - qsa:O6P43_008300 544.658