Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00280 ATGCCATCACGCCAGTTCTTATCGTCTTCGCCTACAGCACTTGCTCCTCACTCATACGTACCCCCAATTTCGTCACTTCATCAATCCCAGTACCCATCTCAACGGCTCGCCGTTCCCCTCTTGGTCTCAACTGCTTCTGGTTGCTCACTCTTCCTTCTCATACTTCTCTGCTTTCGCAAACTCACCGGAAAACATACTACCACTTCTGTAGACTCCGATTCTAAACCCCCTTATCGCTTTCCATTCTCTGTTCTCCGTCGTGCAACGTCAAACTTCTCCAACCGTCTCGGTCATGGCGGTTTTGGTCCTGTTTTTTCTGGTACTTTTCCTTCCACGCACCAATCCATTGCGGTCAAGTTCATGGACCCTACTTCTCTACAAGGCGAGCAGGAATTCCACAACGAGCTTTTCTTTGCTTCTAGGCTTTGTTCTCGGTATGTTGTATCTGCCATTGGTTTCTGTTCTGACGGAAAGCGGCGTAGGTTCTTGCTTGTATATGAGTTAATGCGCAATGGCAATCTGCAGGACGCTCTGTTAACCCGTAAGTATTCTGAACTGATGGATTGGAAAAAACGTTTTGATGTTGTTGTTGATATAGCTAAGGGAATACAATATCTTCATTCATGTGATCCACCTGTTATTCATGGGGATATCAAGCCTAGTAATATTTTGCTGGATAGTAATTTTTGTGCTAAAATAGCGGATTTTGGGCTGGCAAGGTTGAAACCTGAGACTGAATTTGAAAGTGGGGTTTTGGATGTTAATGGTATGGGGAAAACCAATGGTAGGTTGGATTCAGATGTTCATAACAAGAAGGAAGCGGAGAGTAACCGTGGAGTTGGAATTGAGGATTGTGGTTCAGTAGTAGAGGAAACAGAAAGTGTGACTACCGGTTTTGATGACGCTAGTGTTTGTGTGGAGCAGTCACCCGAAAGTTTTGTTAGGATTCCTATCTCAGAGACCTCGCCGGAGACAATTGAGGTCGTTACTACATCACCTGAGACGGGTACTGTCGCAATGGCTTCCCCGTCAGAGGGAACTTTTGATTGGTGTACTGTTGAGCGCGAGAGAGTTGCTAAAGGAGGTGGCAAGAATGAAAATGAGCTAAAGAGTGGTCTAGGAAACAACTTGCGGTCTAAGCAAGATAATGGGGTAGCTCTATCGGGTGAGAATAAGAAGGTTAAAGACTATGTTATGCAATGGATTGGGACTGAGATAAGCAAAGAGGGACCAAAGAGGAATTGGGGGGCATCTACATCAAGTAGTGGAACTACCCCCGGAAATTTTGATAAAAAGAAGGAGAAGAAGAGATTGGAGTGGTGGATATCCATGGATGAAGAGAGGAATTCAAAAAATGCAAAGAAGGAAAAGAGAAAATCTGTAAGGGAATGGTGGAGAGAGGAATACACTGAAGAGCTCACCAGGAAGAAAAAGAAGAATAAGAAACAGAAACAGAAAATTGGGATTGATATGAATGATGCTGATGATGGTTGGTTGGTAAAGGATGATGATTTGTATATGGAGAGAAAGAAGAAAAGGAAAAGCCGGAGTCGGGGCAGCCGCAATAGCTTAGATTGGTGGTTGGAAGGGCTCAGTGGGGACCTCGGGAGAGCTCGCTGGAATAGCTATGACTCAGCTAATGGAGAAATTCCTAAAAGTGGTGGTATTAGCAGTACTCCAAGTACGAGAGGGACAGTTTGTTATGTTGCTCCCGAGTGTGCTTATGCAGGAGATGTATCAGAGAAATGTGATGTATACAGTTTTGGTGTGCTGCTTTTGGTGATCGTCTCTGGGCGACGACCACTTCATGTGTCTGGTTCACCGATTTCAGATTTTCAACGAGCCAATCTTTTGTCATGGACGCGTCATTGTGCTCGACATGGGAAACTACTTGAGCTGGTTGATAAGTCCATTCAGTCATTAGATAAGGAACAAGCTGTCCTATGCATTACAGTTGCTCTACTTTGTTTGCAAAAATCATCTTCTCGTCGGCCATCCATGATAGAGGTTGTAGGGATGCTTACTGGTGATTTGCAGCCACCCAACTTACCAATTGAATTATCACCCTCAAATCCATCTTATCTCTCAATCAAGTCTCGTAGGAAGGTCCGGTGA 2115 0.4454 MPSRQFLSSSPTALAPHSYVPPISSLHQSQYPSQRLAVPLLVSTASGCSLFLLILLCFRKLTGKHTTTSVDSDSKPPYRFPFSVLRRATSNFSNRLGHGGFGPVFSGTFPSTHQSIAVKFMDPTSLQGEQEFHNELFFASRLCSRYVVSAIGFCSDGKRRRFLLVYELMRNGNLQDALLTRKYSELMDWKKRFDVVVDIAKGIQYLHSCDPPVIHGDIKPSNILLDSNFCAKIADFGLARLKPETEFESGVLDVNGMGKTNGRLDSDVHNKKEAESNRGVGIEDCGSVVEETESVTTGFDDASVCVEQSPESFVRIPISETSPETIEVVTTSPETGTVAMASPSEGTFDWCTVERERVAKGGGKNENELKSGLGNNLRSKQDNGVALSGENKKVKDYVMQWIGTEISKEGPKRNWGASTSSSGTTPGNFDKKKEKKRLEWWISMDEERNSKNAKKEKRKSVREWWREEYTEELTRKKKKNKKQKQKIGIDMNDADDGWLVKDDDLYMERKKKRKSRSRGSRNSLDWWLEGLSGDLGRARWNSYDSANGEIPKSGGISSTPSTRGTVCYVAPECAYAGDVSEKCDVYSFGVLLLVIVSGRRPLHVSGSPISDFQRANLLSWTRHCARHGKLLELVDKSIQSLDKEQAVLCITVALLCLQKSSSRRPSMIEVVGMLTGDLQPPNLPIELSPSNPSYLSIKSRRKVR* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00280 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Pte7g00280 704 Gene3D Phosphorylase Kinase; domain 1 78 168 - -
Pte7g00280 704 MobiDBLite consensus disorder prediction 369 383 - -
Pte7g00280 704 MobiDBLite consensus disorder prediction 409 432 - -
Pte7g00280 704 Gene3D Transferase(Phosphotransferase) domain 1 530 680 - -
Pte7g00280 704 Gene3D Transferase(Phosphotransferase) domain 1 169 271 - -
Pte7g00280 704 ProSiteProfiles Protein kinase domain profile. 90 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00280 704 SMART serkin_6 90 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00280 704 Pfam Protein tyrosine and serine/threonine kinase 559 672 IPR001245 GO:0004672|GO:0006468
Pte7g00280 704 Pfam Protein tyrosine and serine/threonine kinase 92 242 IPR001245 GO:0004672|GO:0006468
Pte7g00280 704 Coils Coil 466 486 - -
Pte7g00280 704 MobiDBLite consensus disorder prediction 362 383 - -
Pte7g00280 704 PANTHER OS07G0586332 PROTEIN 1 704 IPR044576 -
Pte7g00280 704 SUPERFAMILY Protein kinase-like (PK-like) 69 690 IPR011009 -
Pte7g00280 704 MobiDBLite consensus disorder prediction 413 427 - -
Pte7g00280 704 FunFam Os07g0541700 protein 169 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00280 Pte-Chr7 3829357 3832051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00280 552 675 Receptor kinase-like Gene Family AT3G58690 34.615 3.49e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pte7g00280 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00280 - - qsa:O6P43_008299 861.292