Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00273 ATGGTCGAGAGTGTGAGCGAGAAAAAGGTCAAGAAGAAGATGAAAAAGAAAGATGCTTCGGCCGAGCAGAAGGTGAAGAAGAATTTGAAAGAGAAGGAGAGTGGTAAGAAGCGTAAAGCTTTGGAATCCGACGAGGAGAGGAGCGAGACTAGTTCTGAGCTGGTGGAGCCTGTGAATTCCAAGGCCAAGGATGATGAACACAAGAGTAAGAAGTTGAAAGCAAAGTTGGATTTTGAAACCAATGAGGAGGAAGACGGAGAAGAGGTTGCGAAGGCTGATGATCCGAATGCTGTCACCAATTTTAGGATATCGGAGCCGTTGAGGAATCAGCTGAAGGACAAGGGGATCGAGTCTTTGTTCCCGATTCAAGCCATGACTTTTAGTATTATACTTGATGGGACTGATTTGGTTGGTAGAGCACGAACGGGTCAGGGGAAAACGCTGGCATTTGTGCTGCCTATATTGGAGTCCTTGACAAATGGTCCTGCAAAATCGTCAAGGAAGACTGGATATGGAAGGGCTCCAAGTGTTCTTGTCCTTTTACCTACAAGGGAGTTGGCTAATCAGGTTTATACTGACTTCAAAGTATATGGTGGGGCATTGGGATTGAATTCTTGCTGTTTGTATGGTGGAGCTCCATATCATTCTCAAGAAACTGCACTCAAGAGAGGGGTTGATATTGTCATCGGAACGCCTGGTCGCATAAAGGATCATATCGAGAGGGGAAATATCGACTTCAGCTCTTTGAAGTTTAGAGTCCTTGATGAGGCTGATGAAATGTTGAGGATGGGTTTTGTTGAAGATGTTGAACTCATTCTTGGCAAGGTGGAGGATGTAAGTAAGGTTCAGACACTTCTTTTCAGTGCCACTTTACCAGATTGGGTTAAGCAGATTTCAACTAAGTTTCTGAAACGGGATAAGAAAACTGTGGACCTTGTTGGTAACCAAAAAATGAAGGCAAGCACCAATGTCAGGCACATTGTTCTTCCTTGTACAAGTAATGCAAGATCGCAACTCATTCCAGACATAATTCGGTGTTATAGCAGTGGAGGCCGAACGATAATATTCACTGAGACAAAGGAGTCTGCGTCCGAGCTTGCAGGCTTGTTGCCTGGTGCTCGTGCTCTACATGGTGACATACAACAGTCACAACGAGAGGTTACATTGTCTGGTTTCAGAAACGGAAAGTTTATGACTCTAGTCGCAACAAATGTGGCTGCAAGGGGATTGGATATCAATGATGTTCAATTAATCATTCAGTGTGAACCTCCACGCGATGTAGAAGCCTATATTCATCGATCTGGACGCACTGGAAGAGCCGGTAATACTGGAGTTGCTGTAATGCTTTATGACCCAAGGAGATCTAATGTATCTAGGATAGAAAGAGAATCTGGTGTTAAGTTTGAGCATATATCAGCTCCTAAGCCTGATGATATAGCAAAGGCTATGGGTGGTGACGCTGCAGAGATGATAAGCCAAGTGTCTGATAGCGTGATTCCTGCTTTCAAGTCTGCTGCTGAGGAGCTGTTGAGCAACTCCAAATTATCTGCAGTTGAATTACTTGCAAAAGCCCTTGCAAAGGCTGTTGGTTATACTGAGGCAAAGAAAAGATCACTTCTGACTTCAATGGAGAATCACGTTACTTTGCTTCTTGAGACTGGAAGACCCACATACTCCCCTTCTTATGCTTATGGAGTCCTAAGGAGATTCTTGCCGGAGGAGAAAGTTGAGTCAGTGAAAGGCCTGACTCTCACTGCTGATGGAAATGGTGTCGTCTTTGATGTGTCAGCTGAAGATGTGGATACATTTCTTGCTGGCCAGGAAAACGCAGCTAATGTGAGCTTAGAGATACTGCAATCCTTACCACGCTTGCAAGAGAGAGAACAATCAAAAGGAAGATTCGGCGGTGGGAGAGGTGGATTTGGCAATAGAAGTGGTGGACGAGGATTTTCCGGTGGGAGAGGAGGAAGAGGGGGCAGGGGTGGTAGTTTTTCAGGTGGCCGAGGTGGTGGCTACAAAGGGCAGAGATGGTAA 2034 0.4523 MVESVSEKKVKKKMKKKDASAEQKVKKNLKEKESGKKRKALESDEERSETSSELVEPVNSKAKDDEHKSKKLKAKLDFETNEEEDGEEVAKADDPNAVTNFRISEPLRNQLKDKGIESLFPIQAMTFSIILDGTDLVGRARTGQGKTLAFVLPILESLTNGPAKSSRKTGYGRAPSVLVLLPTRELANQVYTDFKVYGGALGLNSCCLYGGAPYHSQETALKRGVDIVIGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDVSKVQTLLFSATLPDWVKQISTKFLKRDKKTVDLVGNQKMKASTNVRHIVLPCTSNARSQLIPDIIRCYSSGGRTIIFTETKESASELAGLLPGARALHGDIQQSQREVTLSGFRNGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNVSRIERESGVKFEHISAPKPDDIAKAMGGDAAEMISQVSDSVIPAFKSAAEELLSNSKLSAVELLAKALAKAVGYTEAKKRSLLTSMENHVTLLLETGRPTYSPSYAYGVLRRFLPEEKVESVKGLTLTADGNGVVFDVSAEDVDTFLAGQENAANVSLEILQSLPRLQEREQSKGRFGGGRGGFGNRSGGRGFSGGRGGRGGRGGSFSGGRGGGYKGQRW* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00273 677 Gene3D - 319 548 IPR027417 -
Pte7g00273 677 Pfam Helicase conserved C-terminal domain 343 441 IPR001650 -
Pte7g00273 677 SUPERFAMILY RNA-binding domain, RBD 535 616 IPR035979 GO:0003676
Pte7g00273 677 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 20 532 - -
Pte7g00273 677 SMART ultradead3 115 327 IPR014001 -
Pte7g00273 677 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 338 480 IPR001650 -
Pte7g00273 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 453 IPR027417 -
Pte7g00273 677 MobiDBLite consensus disorder prediction 16 80 - -
Pte7g00273 677 MobiDBLite consensus disorder prediction 628 677 - -
Pte7g00273 677 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 253 261 IPR000629 -
Pte7g00273 677 Pfam GUCT (NUC152) domain 530 625 IPR012562 GO:0003723|GO:0004386|GO:0005524
Pte7g00273 677 Gene3D - 549 619 - -
Pte7g00273 677 SMART helicmild6 364 441 IPR001650 -
Pte7g00273 677 Gene3D - 48 311 IPR027417 -
Pte7g00273 677 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 127 309 IPR014001 -
Pte7g00273 677 MobiDBLite consensus disorder prediction 1 95 - -
Pte7g00273 677 CDD SF2_C_DEAD 324 450 - -
Pte7g00273 677 CDD GUCT_RH7_like 537 622 - -
Pte7g00273 677 FunFam DEAD-box ATP-dependent RNA helicase 7 547 619 - -
Pte7g00273 677 Pfam DEAD/DEAH box helicase 120 297 IPR011545 GO:0003676|GO:0005524
Pte7g00273 677 CDD DEADc 107 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00273 Pte-Chr7 3751179 3756161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00273 133 447 Eukaryotic Initiation Factors Gene Family AT1G72730 31.498 1.05e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00273 K16911 - qsa:O6P43_005503 955.281