Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00262 ATGGAGGCACGAGAGATTTTTGCTTCTGGACTTGCTAGTAATGAAGCTCCTGGGAGCTACCATGTGGCTCCAACGAACGAAAATAGTGTCCTGAGTGGGCCCACAATGCTTGCTCATTTTAATGAACCGACAAAAGCACCGGAACCGGCAGTGACACAAGCTCCAGCACTGGCTCAGGAACCGGCACTGGTACCGGTTCCAGCACCACCGGCATCAGTATCAGCTGCACAACCAGTGAGTGTGTCTGCGTCTCCAGGTACGGCACTGAAAAAGAAGAGAGGGAGGCCACGGAAGTACGCTCCTGATGGTTCTGTAGCATTAGCATTGTCTCCAATGCCAATCTCTTCATCCATTCCTCTTACCGGTGAGTTCTCAGCTTGGAAACGAGGTAGAGGCCGGCCCATGGAACACATCAAAAAGACATTTAAATATGACTATGAAACTCCAGGTGACAAAGTAGCGTATTCAGTCGGTGCAAATTTCACTCCTCATGTGCTTACTGTTAATGCTGGAGAGGATGTAACCATGAAGATTATGTCATTCTCTCAACAAGCATCCCGTGCTATTTGCATTCTTTCGGCAACAGGAACAATTTCAAATGTCACACTTCGTCAGCCTACCACTTCTGGGGGAACGCTAACTTATGAGGGTCGATTTGAGATACTTTCCTTGTCTGGTTCATTTATGCCAACTGAGAATGGAATGACAAAGAGCAGATCTGGAGGGATGAGTGTCTCTTTGGCAGGCCCTGATGGTCGCGTCATTGGTGGAGGCCTTGCTGGTCTGCTGGTAGCTGCAGGTCCTGTACAGGTTGTAGTGGGGAGTTTCCTACCAGGTCATCAGCAGGAGCAGAAACCCAAGAAGCACAGAATGGAGACGATATCAGTCATCACACCTTCTCATGTTAATTCAATCTCTTCTGAAGAAGCAAAAGGCGCATTTGGTGGTATAAAGCCTATTGTAACTCCTACCGCATTCCATGTAGACAATCAAGTTCTTTTTAATAATGTCCAGGGATTCAAGACTTTATCTGCTGACACCAATATCTCTTTGCATGAAGATGAATCTAGAGACCCGAGCCAATCAAACTGCGAAGTGTCATACTAA 1107 0.4706 MEAREIFASGLASNEAPGSYHVAPTNENSVLSGPTMLAHFNEPTKAPEPAVTQAPALAQEPALVPVPAPPASVSAAQPVSVSASPGTALKKKRGRPRKYAPDGSVALALSPMPISSSIPLTGEFSAWKRGRGRPMEHIKKTFKYDYETPGDKVAYSVGANFTPHVLTVNAGEDVTMKIMSFSQQASRAICILSATGTISNVTLRQPTTSGGTLTYEGRFEILSLSGSFMPTENGMTKSRSGGMSVSLAGPDGRVIGGGLAGLLVAAGPVQVVVGSFLPGHQQEQKPKKHRMETISVITPSHVNSISSEEAKGAFGGIKPIVTPTAFHVDNQVLFNNVQGFKTLSADTNISLHEDESRDPSQSNCEVSY* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00262 368 Gene3D - 163 299 - -
Pte7g00262 368 MobiDBLite consensus disorder prediction 68 102 - -
Pte7g00262 368 MobiDBLite consensus disorder prediction 1 52 - -
Pte7g00262 368 MobiDBLite consensus disorder prediction 19 35 - -
Pte7g00262 368 SMART AT_hook_2 90 102 IPR017956 GO:0003677
Pte7g00262 368 SMART AT_hook_2 128 140 IPR017956 GO:0003677
Pte7g00262 368 FunFam AT-hook motif nuclear-localized protein 1-like 163 294 - -
Pte7g00262 368 ProSiteProfiles PPC domain profile profile. 158 297 IPR005175 -
Pte7g00262 368 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 283 - -
Pte7g00262 368 CDD DUF296 162 276 IPR005175 -
Pte7g00262 368 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 62 302 IPR039605 GO:0003680
Pte7g00262 368 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 276 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00262 Pte-Chr7 3576311 3580677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00262 78 335 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 53.156 1.53e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00262 - - qsa:O6P43_005480 460.299