Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00260 ATGGGCTTTTGGGGTATTGAAGTGAAACCTGAGAAACCATATCCTTTTCATTCTGACAATGTACGAGGAAGGCTTCATATAACTCAGGCTACTTTAGGACTCGGCTCATCATCAGAGAGAAGTATTGTTCAGTGTGCTGTGGGACGCAAAAATCCCATCTTCTTGTGTGCCTTGTTACCAGATAAGGTTGAGTCCTGCCCATTGGATCTCGAATTTGAGGATGAGGAATTAGTAGCCTTCTCAGTGATTGGACCCCGAAGTGTCCACTTATCTGGTTATTTTGTGGCTGACGATGGGGATGATCTCAAGGATGATTATGAATATGGTTCTCTTGGGGAGGATTATGGAGAAACAGAGACTGATGAGTCGTCTGAATATGATACTGAAGATGACTATGGTGCTGGGTTCACCGATAGTGATCTTGAGATGTTTCCTGCTTCACCTGTGAAAAACAGAGGAGTTGTCATCGAGGAAATCATAGATGATGAAAAACCTGCAAATGAAGATGGTCAATCGAAAAGAGCTAAGAAGAAAAATCAGAAAAATAACTTGGACGATAGCAGTAACTCTCTGAAACAGATAGTTGTTCAGGGTGATGCTGCCGTTCATGTTCTGGAAAGTGAAGATGAAGATGGTTTTCCAATTTCTCAGTCAGATAAAAAGATGTTTGATTCAAAGCCAGAATCAGAAGTAAAAACTGGACACATGGAACTTGAGACTAAAACTAAGAAGGTACCAAAAGATGCTGATGGTGCGGACACCTTAAAGAGGAAAAGTGATAGAGTGGACCAAGATCTATTAGAAGGTGAAAGAAAGAAGAATAATAATAATAAGAAGAAGAAGAAGCAGGACAAGGGGGAAAATGCCCATGAGTTCGTTGGTGATGTGGAGACAAATGTGACTAAAGACAAAGAAGACCATACTGAAGAGGTGAAGGCTGAGAGTGAAGAAAAGCTCTCCAATGAAAAGGGTCAAATTGAGAAGAAAAAGAAGAAACAAGAGAAGAAAAAGAAGAAGGATGTAGGGATTAACAGTACAGATGAAGGTGCTGAAAAAATTGAGAATGCATCGACATTGAATTCAGAAGAGAAGCAAAAGGAACCCAAGTCTTCTAAGGTGAGAACATATGCAAATGGCTTGGTTGTTGAGGAACTGTCAATGGGTAAACCAGATGGAAAAAAGGCTTCCCCTGGATCACAGGTGTCAGTTCAGTACATTGGCAAGTTAAGAAATAATGGGAAAATATTTGATTCAAATGTGGGAAGAGCCCCCTTCAAGTTTCGCCTAGGTGTTGGACAAGTTATCAAGGGATGGGATGTTGGATTAAATGGCATGAGAATTGGAGACAAGCGTAGAATAACCATTCCGCCATCAATGGGTTATGGTGCCAAACGTGCTGGGACCATTCCACCAAATTCCTGGCTTGTTTTTGATGTTGACTTGGTCGATGTTCGTTGA 1458 0.4108 MGFWGIEVKPEKPYPFHSDNVRGRLHITQATLGLGSSSERSIVQCAVGRKNPIFLCALLPDKVESCPLDLEFEDEELVAFSVIGPRSVHLSGYFVADDGDDLKDDYEYGSLGEDYGETETDESSEYDTEDDYGAGFTDSDLEMFPASPVKNRGVVIEEIIDDEKPANEDGQSKRAKKKNQKNNLDDSSNSLKQIVVQGDAAVHVLESEDEDGFPISQSDKKMFDSKPESEVKTGHMELETKTKKVPKDADGADTLKRKSDRVDQDLLEGERKKNNNNKKKKKQDKGENAHEFVGDVETNVTKDKEDHTEEVKAESEEKLSNEKGQIEKKKKKQEKKKKKDVGINSTDEGAEKIENASTLNSEEKQKEPKSSKVRTYANGLVVEELSMGKPDGKKASPGSQVSVQYIGKLRNNGKIFDSNVGRAPFKFRLGVGQVIKGWDVGLNGMRIGDKRRITIPPSMGYGAKRAGTIPPNSWLVFDVDLVDVR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00260 485 MobiDBLite consensus disorder prediction 107 132 - -
Pte7g00260 485 Gene3D Nucleoplasmin core domain 1 100 - -
Pte7g00260 485 SUPERFAMILY FKBP-like 336 484 - -
Pte7g00260 485 MobiDBLite consensus disorder prediction 203 329 - -
Pte7g00260 485 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 398 485 IPR001179 GO:0003755
Pte7g00260 485 MobiDBLite consensus disorder prediction 111 132 - -
Pte7g00260 485 MobiDBLite consensus disorder prediction 357 371 - -
Pte7g00260 485 MobiDBLite consensus disorder prediction 161 183 - -
Pte7g00260 485 MobiDBLite consensus disorder prediction 161 375 - -
Pte7g00260 485 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 281 - -
Pte7g00260 485 PIRSF FK506-bp_FPR3 192 485 IPR023566 GO:0003755
Pte7g00260 485 PIRSF FK506-bp_FPR3 1 53 IPR023566 GO:0003755
Pte7g00260 485 PIRSF FK506-bp_FPR3 49 248 IPR023566 GO:0003755
Pte7g00260 485 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Pte7g00260 485 Gene3D - 352 484 IPR046357 GO:0003755
Pte7g00260 485 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 393 482 IPR001179 GO:0003755
Pte7g00260 485 Coils Coil 312 339 - -
Pte7g00260 485 FunFam Peptidyl-prolyl cis-trans isomerase 372 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00260 Pte-Chr7 3569001 3573625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00260 398 485 Calmodulin-binding Proteins AT5G48570 48.889 9.74e-18 84.3