Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00237 ATGCCTACCTCTATACAGAGTTCTGACAGCAATTGTGCTGGGTTTATATTCAACAAGTTGCTCAAGCAGATTGGAGACCCTGTGGACTTTGAACTTCCTGAATGGTTTGATAAATGGAAACCACTGCATTACAAGTTCATTAAGCGCAATATATATTTGACGAAGAGGATCAAAAGGCGGCTCGAGGACGATGGCATATTCTGTTCTTGTACTGCAACCCCTGGATCTTCAGGTGTATGTGACAGAGATTGCCACTGCGGGATGCTCTTATCTAGCTGTTCTGTGGTTTGTAAATGTGGCAGTGCATGCCTAAATAAACCATTTCAGCAGCGGCCAGTTAAAAAGATGAAATTGGTGCAGACCGAGAAATGTGGATCTGGAATTGTTGCGGATGAAGATATAAAGCAAGGAGAATTTGTCATAGAGTATGTTGGAGAAGTTATTGATGATAAAACTTGTGAGGAAAGACTTTGGAAAATGAAACATCGTGGAGAGACAAACTTTTACCTATGTGAGATCAACCGCGATATGGTTATTGATGCCACTTACAAGGGGAACAAGTCGAGATATATAAATCATAGTTGCTGCCCCAATACCGAGATGCAGAAATGGATAATTGATGGTGAAACTAGAATTGGCATATTTGCTACTCGTGACATTAAGAGGGGGGAGCACCTGACTTATGATTACCAGTTTGTGCAATTTGGTGCAGATCAAGACTGCCACTGTGGAGCTGTTAGTTGCAGGCGTAAGCTTGGTGTCAAACCCACCAAGCCTAAAATGTCTTCTGATGCTGCAGTGGAAATAGTAGCATACAAGGTTTATCAGAATGGACGCCTGCCTGAAGGTGACCTCAGCATTTATCCCTTTAGTATGGTATAA 882 0.4218 MPTSIQSSDSNCAGFIFNKLLKQIGDPVDFELPEWFDKWKPLHYKFIKRNIYLTKRIKRRLEDDGIFCSCTATPGSSGVCDRDCHCGMLLSSCSVVCKCGSACLNKPFQQRPVKKMKLVQTEKCGSGIVADEDIKQGEFVIEYVGEVIDDKTCEERLWKMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKRGEHLTYDYQFVQFGADQDCHCGAVSCRRKLGVKPTKPKMSSDAAVEIVAYKVYQNGRLPEGDLSIYPFSMV* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00237 293 ProSiteProfiles Post-SET domain profile. 237 253 IPR003616 -
Pte7g00237 293 PANTHER SET DOMAIN PROTEINS 30 260 - -
Pte7g00237 293 Gene3D SET domain 34 269 IPR046341 -
Pte7g00237 293 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 284 IPR025787 -
Pte7g00237 293 ProSiteProfiles SET domain profile. 114 231 IPR001214 GO:0005515
Pte7g00237 293 FunFam Histone-lysine N-methyltransferase 30 269 - -
Pte7g00237 293 ProSiteProfiles AWS domain profile. 63 112 IPR006560 GO:0005634|GO:0042054
Pte7g00237 293 Pfam SET domain 125 230 IPR001214 GO:0005515
Pte7g00237 293 SMART shorttest3 63 113 IPR006560 GO:0005634|GO:0042054
Pte7g00237 293 SMART set_7 114 237 IPR001214 GO:0005515
Pte7g00237 293 SMART PostSET_3 237 253 IPR003616 -
Pte7g00237 293 SUPERFAMILY SET domain 37 249 IPR046341 -
Pte7g00237 293 CDD SET_ASHR3-like 115 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00237 Pte-Chr7 3252874 3257770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00237 87 249 C2H2 Transcription Factor Family AT2G23740 33.880 9.65e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte7g00237 SET 1.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00237 - - jre:109005024 516.924