Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00223 ATGGCTACAGAAGTCGACAGGCTCATCTGGTTAATGTCAAATCAATATTTAGAGATGGGGTTAGACATCGATGCCATGCTTGCTTCGGTAGACGAATCGCATCGTAGAGTAGAAGCATCCAAGTGCTTTGTATCAAACTTGCCTACTGTACAGCTGGTTCCTGCTGCGATAGCCAATCCTGATCTTGATGTTTGTGCTGTGTGCATGGAGGAATTCAACCAGAGCAGATGCAACGAGTACTCTATTAAGCAAGTTCCTTGTGGCCATGTCTACCATGAGAACTGCATAACCAATTGGCTTTCCAATAATAGCTCTTGCCCTCTATGCCGTTTTAAGTTCTCAATCAACCATGGTTGA 357 0.4426 MATEVDRLIWLMSNQYLEMGLDIDAMLASVDESHRRVEASKCFVSNLPTVQLVPAAIANPDLDVCAVCMEEFNQSRCNEYSIKQVPCGHVYHENCITNWLSNNSSCPLCRFKFSINHG* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00223 118 SMART ring_2 65 109 IPR001841 -
Pte7g00223 118 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 38 112 - -
Pte7g00223 118 Pfam Ring finger domain 64 110 IPR001841 -
Pte7g00223 118 SUPERFAMILY RING/U-box 58 116 - -
Pte7g00223 118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 115 IPR013083 -
Pte7g00223 118 ProSiteProfiles Zinc finger RING-type profile. 65 110 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00223 Pte-Chr7 2857701 2858538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00223 47 119 C3H Transcription Factor Family AT3G30460 41.892 1.59e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00223 - K11982 qsa:O6P43_003971 108.227