Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00216 ATGCCAATTGGTAGGTATGCAATTGGAAGAGCAGATGAGGCTGCACATCCAGACTCCTTGAGAGCAACTTTAGCTGAATTCCTCTCCACTCTCATCTTTGTCTTCGCTGGTGAAGGCTCTATGTTAGCCCTTGATAAGATTTATGCAGGAACTGAATCTTCAGCTGCTGAGCTGGTTGCTGTAGCGTTAGCACATGCCTTTGCGTTATTTGCTGCCATTTCGTCTAGCATCAATATCTCAGGAGGACACGTCAACCCTGCTGTGACGTTTGGTGCCCTTGTAGGAGGAAGGGTGTCTCTGATCCGCGCCTTGTACTACTGGGTTGCACAACTGCTCGGTGCCATCGTGGCCGCCATCTTGTTACGGCTGGTCACACATGGAATGAGACCTGTGGCGTTCCACGTTTCCTCAGGGACTGCAGAGGCGCATGGCCTTATATTCGAGATCGTGATGACATTTGGTTTGGTATACACAGTCTATGCTACTGCCATTGATCCCAAGAGAGGCGCCATGGGGACAATTGCACCACTATCCATTGCATTCATTGTTGGGGCAAATATCCTTGCGGGTGGACCATTTGATGGAGCATCCATGAACCCTGCAAGGGCATTTGGACCTGCATTGGTAGGGTGGAGATGGAAAAACCACTGGATCTATTGGGTTGGCCCGTTCGTCGGAGCCGGCCTTGCTGGATTGATATACGAATACTTGGTGATACCGGTAGAGGCGCCTCTCACTCACCAGCCATTGGCTCCTGAAGACTATTAG 768 0.5065 MPIGRYAIGRADEAAHPDSLRATLAEFLSTLIFVFAGEGSMLALDKIYAGTESSAAELVAVALAHAFALFAAISSSINISGGHVNPAVTFGALVGGRVSLIRALYYWVAQLLGAIVAAILLRLVTHGMRPVAFHVSSGTAEAHGLIFEIVMTFGLVYTVYATAIDPKRGAMGTIAPLSIAFIVGANILAGGPFDGASMNPARAFGPALVGWRWKNHWIYWVGPFVGAGLAGLIYEYLVIPVEAPLTHQPLAPEDY* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00216 255 Pfam Major intrinsic protein 15 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 SUPERFAMILY Aquaporin-like 14 241 IPR023271 -
Pte7g00216 255 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pte7g00216 255 Gene3D Glycerol uptake facilitator protein. 4 244 IPR023271 -
Pte7g00216 255 FunFam Probable aquaporin TIP1-1 4 251 - -
Pte7g00216 255 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00216 255 PANTHER AQUAPORIN-8 6 242 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00216 Pte-Chr7 2802500 2804137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00216 6 256 Major Intrinsic Protein MIP AT1G17810 72.308 2.46e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00216 K09873 - qsa:O6P43_008350 400.593