Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00202 ATGCGTTTCCCCTCTTTCTGTGAGTTCCTGCGGCCCTTGTGTGTTCTTTTCTGTTCAAATCGTAATCTCCTGTTGCTCTGCGTCAATCATACAGTAAAGGAATTAGCAAATCAAAAAAACCAAGAAAGGCTTGGAACTGCCAGTTTTGAGATCGGGTTGGCAATCATGAATGAGAAGGCATCTGTGTCTAAAGAGCTCAATGCTAGGAATGCCAAGATTCTAGAGGGTCTTCTTAAGCAGGCAGAAAATCGGGAGTGTGCTGATTGTCGAACCAAGGCTCCAAGATGGGCAAGTGTCAACCTTGGAATTTTTATCTGTATGCAATGTTCAGGTATCCACCGGAGTCTTGGAGTTCATATATCAAAGGTGCGCTCCACCACACTTGATACCTGGCTTCCAGAACAAGTTGCTTTTATGCATGCTATGGGTAATCAAAAGTCAAACAATCACTGGGAAGCAAAACTGCCCAAGGATTTTGACAGAGTTGGATTTGGACTTGAGAAGTTCATTCGTGCCAAATATGTAGAGAAAAGATGGGTTGCTAATGGTGCACTGCCTCCAACTCCGACTTCAGGTGAATTGCATAATATTGTAAAAAAGTTATCTGATACGGGACCTAAAAGTGGTGTTCCAAGGGGTTCAAGAAGGCTTTCTCTTGATGAAAGTATACTTACAAAGCATGTGACAGATGCTATCTATCCAGTAACGAGATCTCGTGGGGGTTCTTTTGATACGGAGACAAAGAGTACTTCTCACCCGTTACACTGTCCTCCACCTATAGATTTCAATACTTCCAAAAGAAAGAGTAATGATACCACAGAAGTTTTGAATTTGTTTTCTGGCCACGAGAAGATACCGGATTTCGCAATTGCACCTCCATCACCTTGGACAACTTTTGACTGTAAGGATAACCTGAAAATATCTTCCAGTCTTTACGAGATCTTCTATTTGATTGTTCCCTTTAATGCTTCATTTAGGAGCAATTTCAATTAG 993 0.4169 MRFPSFCEFLRPLCVLFCSNRNLLLLCVNHTVKELANQKNQERLGTASFEIGLAIMNEKASVSKELNARNAKILEGLLKQAENRECADCRTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPEQVAFMHAMGNQKSNNHWEAKLPKDFDRVGFGLEKFIRAKYVEKRWVANGALPPTPTSGELHNIVKKLSDTGPKSGVPRGSRRLSLDESILTKHVTDAIYPVTRSRGGSFDTETKSTSHPLHCPPPIDFNTSKRKSNDTTEVLNLFSGHEKIPDFAIAPPSPWTTFDCKDNLKISSSLYEIFYLIVPFNASFRSNFN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00202 330 SUPERFAMILY ArfGap/RecO-like zinc finger 70 181 IPR037278 -
Pte7g00202 330 SMART arf_gap_3 71 189 IPR001164 GO:0005096
Pte7g00202 330 FunFam stromal membrane-associated protein 1 isoform X1 56 184 - -
Pte7g00202 330 ProSiteProfiles ARF GTPase-activating proteins domain profile. 71 180 IPR001164 GO:0005096
Pte7g00202 330 Pfam Putative GTPase activating protein for Arf 72 181 IPR001164 GO:0005096
Pte7g00202 330 CDD ArfGap 74 174 - -
Pte7g00202 330 Gene3D Arf GTPase activating protein 54 184 IPR038508 -
Pte7g00202 330 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 56 247 IPR044520 GO:0005096
Pte7g00202 330 MobiDBLite consensus disorder prediction 239 260 - -
Pte7g00202 330 PRINTS HIV Rev interacting protein signature 102 119 IPR001164 GO:0005096
Pte7g00202 330 PRINTS HIV Rev interacting protein signature 83 102 IPR001164 GO:0005096
Pte7g00202 330 PRINTS HIV Rev interacting protein signature 123 144 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00202 Pte-Chr7 2586372 2590675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00202 74 174 C2H2 Transcription Factor Family AT4G05330 48.598 4.76e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00202 K12486 - gmx:100803735 297.36