Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00195 ATGGAAGAAGCCAAGGAAAAGGGTGCGAATACTGCTCCCACCTACCATGGAGTTCGCAAGCGAAAATGGGGCAAATGGGTGTCTGAGATTCGTGAGCCAGGGAAGAAGAGTAGAATTTGGTTAGGAAGCTACCAAGCACCCGAAATGGCAGCGGCAGCTTATGACGTAGCAGCTCTGCACCTTAAAGGGAGCTCTGCACGCCTCAACTTTCCCGAGCTGGTCGAAAGTTTCCCACGTCCGCTAAGTTCAAGGGCTGAGGATGTGCAGTTGGCAGCTCAAGAGGCAGCATTGAGGTTTAAGAGACCGGTGGTGGGTGTGGGTTCAGAGAATTGGACAGTGCCAGTGACAGTGGGGTTGTCACCCTGCCAGATTCAGGCCATCAATGAGTCGCCACTGGATTCACCAAAGATGTGGATGCCAACGAGGGAGGCAGTGAAGTTAGATTGGGATGGGTCTCAGGCATTCTACAATGATAGTTTTGTTGATTTGTGCAATTGGGAAGAAATACAGTATCAGTATGTGTCCATATGGGATTCCTGA 540 0.5056 MEEAKEKGANTAPTYHGVRKRKWGKWVSEIREPGKKSRIWLGSYQAPEMAAAAYDVAALHLKGSSARLNFPELVESFPRPLSSRAEDVQLAAQEAALRFKRPVVGVGSENWTVPVTVGLSPCQIQAINESPLDSPKMWMPTREAVKLDWDGSQAFYNDSFVDLCNWEEIQYQYVSIWDS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00195 179 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Pte7g00195 179 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
Pte7g00195 179 PRINTS Ethylene responsive element binding protein signature 53 73 IPR001471 GO:0003700|GO:0006355
Pte7g00195 179 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Pte7g00195 179 FunFam Ethylene-responsive transcription factor 2 14 72 - -
Pte7g00195 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 114 - -
Pte7g00195 179 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
Pte7g00195 179 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Pte7g00195 179 Gene3D AP2/ERF domain 14 73 IPR036955 GO:0003700|GO:0006355
Pte7g00195 179 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00195 Pte-Chr7 2512806 2513366 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00195 2 178 AP2-EREBP Transcription Factor Family AT1G71450 47.541 8.73e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g00195 AP2 1.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00195 - - qsu:111995063 219.935