Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00193 ATGCAAGACATCTACTACATGGATGCTGCACCAAGTCGGGTCGGCACTAGCAATACTACGTATAGTACCTCAGGTGCTTCTAGCTCACCTTATAGAGGAGTCCGGAAGAGAAAGTGGGGCAAATGGGTGTCTGAGATTCGTGAACCAGGCACCAAAACAAGGATTTGGTTAGGGAGCTTCGAGACACCGGAAATGGCGGCAGCAGCCTATGATGTCGCCGCACTGCATTTTCGAGGATGCGACGCGAGGATAAACTTCCCTCAATTGGTGAATAGCCTCCCCCATCCAGTAAGCAACAATGCCGAAGACATAAGAATGGCAGCACATGAGGCTGCCCTGAGGTTAAGGACCAACAAAGACCAAGTGGATGGAGCTGGTGGTGGCTCTAGCTCAAGAGCTGGTGGGGCACGGGCACCCATCACAGTGAGACTCTCTCCAACTCAAATTCAGGCCATCAACGAGTCACCTCTGGATTCACCCAAGATGTGGATGCAAATGACAGAAGCACTCATGTCTGAGGAGTCTATTATGTATGCTAATAATTTTGAGGAGATTGAGTGGGAGGATATACAAAATGATTCTCTCTGGGATCCTTAG 597 0.4958 MQDIYYMDAAPSRVGTSNTTYSTSGASSSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGCDARINFPQLVNSLPHPVSNNAEDIRMAAHEAALRLRTNKDQVDGAGGGSSSRAGGARAPITVRLSPTQIQAINESPLDSPKMWMQMTEALMSEESIMYANNFEEIEWEDIQNDSLWDP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00193 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 165 - -
Pte7g00193 198 SUPERFAMILY DNA-binding domain 29 88 IPR016177 GO:0003677
Pte7g00193 198 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Pte7g00193 198 CDD AP2 31 87 IPR001471 GO:0003700|GO:0006355
Pte7g00193 198 MobiDBLite consensus disorder prediction 118 139 - -
Pte7g00193 198 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Pte7g00193 198 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Pte7g00193 198 FunFam Ethylene-responsive transcription factor 2 29 88 - -
Pte7g00193 198 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Pte7g00193 198 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
Pte7g00193 198 Pfam AP2 domain 31 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00193 Pte-Chr7 2508416 2509260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00193 15 199 AP2-EREBP Transcription Factor Family AT1G71450 56.216 1.03e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g00193 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00193 - - zju:107421318 264.618