Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00188 ATGGTGAAGGGGCGTCAAGGTGAACGTGTCAGACTCTACGTCAGAGGTACAATACTTGGGTATAAGAGGTCAAAATCAAACCAGTATCCAAACACTTCTTTGATCCAGATTGAGGGTGTAAACACAAAAGAAGAGGTGGCATGGTACTGTGGTAAGCGCATGGCTTACATCTACAAGGCCAAGGTGAAGAAAAATGGAACTCACTACCGCTGCATTTGGGGTAAGGTTGCCAGGCCTCATGGTAATAGTGGAGTTGTTCGCGCCAAGTTCAAGTCAAATTTGCCTCCCAAATCAATGGTACTTTATCAAAATGACCAAAAGCTTGTAATATTTTCAATTCAGTTTTCTGAGCCTTTGTTAATTATGTTTTCAGGGTGCTAG 381 0.4252 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKNGTHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMVLYQNDQKLVIFSIQFSEPLLIMFSGC* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00188 126 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pte7g00188 126 Gene3D translation elongation factor selb, chain A, domain 4 6 104 IPR038661 -
Pte7g00188 126 FunFam 60S ribosomal protein L35a 7 107 - -
Pte7g00188 126 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Pte7g00188 126 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pte7g00188 126 Pfam Ribosomal protein L35Ae 12 99 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pte7g00188 126 SUPERFAMILY Translation proteins 12 99 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00188 Pte-Chr7 2455482 2457534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00188 1 99 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 90.909 5.36e-65 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00188 K02917 - mof:131168367 208.764