Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00182 ATGAACAGAAGTCCTTTCACAGAGGAAGAAGAAGCTCTTCTCTTAGCTTCTCATAGGATCAATGGCAATAGATGGTCTATTATTGCAGGGCTTTTCCCAGGGAGAACTGATAATGCTGTAAAGAATCACTGGCATGTTGTGATAGCAAGGCTACGCCGAGAAGGGTCAAAGCTTTATGCTAAAGGGCCTGCTCAGACGAAATTCTCTCATCAAATACATCAAGCTCATCAAACCAGGGATACGAATCATACTGCTTCCTCTTTCCTTCAAATACGATACGAAGGCTCAAATTTTCCTCCAGCAACATTTAGCACTTCCCAATTTGAAAGACGAGCTTGCGACCTGTCTTTATGCTCTTCTTCCGCAATACATGAAAGGCTTTGCATCACAGTAAAATGTATACAATATAAGTGA 414 0.4155 MNRSPFTEEEEALLLASHRINGNRWSIIAGLFPGRTDNAVKNHWHVVIARLRREGSKLYAKGPAQTKFSHQIHQAHQTRDTNHTASSFLQIRYEGSNFPPATFSTSQFERRACDLSLCSSSAIHERLCITVKCIQYK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00182 137 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 52 IPR017930 -
Pte7g00182 137 PANTHER MYB PROTEIN-RELATED 2 79 - -
Pte7g00182 137 CDD SANT 5 48 IPR001005 -
Pte7g00182 137 SMART sant 2 50 IPR001005 -
Pte7g00182 137 Gene3D - 4 83 - -
Pte7g00182 137 SUPERFAMILY Homeodomain-like 2 50 IPR009057 -
Pte7g00182 137 ProSiteProfiles Myb-like domain profile. 1 48 IPR001005 -
Pte7g00182 137 Pfam Myb-like DNA-binding domain 3 46 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00182 Pte-Chr7 2267964 2268377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00182 1 62 MYB Transcription Factor Family AT1G17950 74.194 1.96e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte7g00182 Myb_DNA-binding 2.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00182 K09422 - qsa:O6P43_005257 122.094