Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00180 ATGATAGCAAGATTGTATCATGCTGCTGTTGAAGAAGATCAAGGAGCGGTGGGTGTGGGAACGGTGGGCTCTTCAGAAGCAATAATGTTGGCAGGTCTCGCATTGAAAAGGAAATGGCAGAATAAGAGAAAATCTCAAAGAAAGCCATATGATAAACCCAACATAGTTACTGGAGCCAATGTACAGGTGTGCTGGGAGAAGTTCGCTAGATATTTTGAGGTTGAGCTAAAGGAGGTAAAGCTTTCAGAGGGATATTACGTGATGGACCCTGAGAAGGCTGTTGAAATGGTTGATGAGAATACCATATGTGTTGCAGCAATTCTGGGGTCAACTCTGACAGGGGAGTTTGAGGATGTCAAACTCCTCAATGAGCTTCTAACCGAAAAGAACAAGGAGACAGGATGGGATGTCCCAATACATGTTGATGCTGCTAGTGGGGGTTTTGTTGCTCCGTTTCTTTACCCTGATATTGAGTGGGATTTTCGTCTGCCATTAGTGAGAAGCATCAATGTAAGTGGTCACAAGTACGGCCTTGTTTACCCTGGTGTGGGGTGGGTTGTCTGGAGAAGCAAGGAAGATTTACCAGACGAACTCATCTTTCACATAAATTATCTTGGATCTGATCAACCCACTTTCACCCTCAACTTTTCAAAAGGATCAAGTCAGATAGTTGCTCAATATTATCAGTTCATACGACTTGGATTCGAGGGTTATAAGAACATCATGATTAATTGCATGGAGAACACGAAATTCCTGAAAGATATAATTGACAAGACAGGGCGGTTTAATATTGTATCCAAAGACTTGGGAGTGCCCCTTGTGGCCTTCTCTCTCAAAGACAGTAGTAAGTACAGTGTGTTTGACATATCTGAGCATTTGAGGAGATTTGGTTGGATTGTTCCTGCTTACACAATGCCACCCAATGCACAACATGTTGCTGTTCTTCGTGTTGTGGTCAGAGAGGATTTTAGCCGGACTCTGGCTGAGAGACTTGCGTCAGACATGGGGAAAGTACTGAAGGATCTGGATGCAATCCCAAATTACGTTGCAACCACAATTGCTCATGTCAGTTCTGGAGCTAAAGAGACAGAAAATGGTGATGAACTCCACAAGCATGGAAAGGAGACTGCAATGGAGACTCAGTTAGAAGTCATCAAGCATTGGAAGAGGTTTGCGGATGGCAGGAAAACTGGACCATGCTAG 1203 0.4381 MIARLYHAAVEEDQGAVGVGTVGSSEAIMLAGLALKRKWQNKRKSQRKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPEKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTEKNKETGWDVPIHVDAASGGFVAPFLYPDIEWDFRLPLVRSINVSGHKYGLVYPGVGWVVWRSKEDLPDELIFHINYLGSDQPTFTLNFSKGSSQIVAQYYQFIRLGFEGYKNIMINCMENTKFLKDIIDKTGRFNIVSKDLGVPLVAFSLKDSSKYSVFDISEHLRRFGWIVPAYTMPPNAQHVAVLRVVVREDFSRTLAERLASDMGKVLKDLDAIPNYVATTIAHVSSGAKETENGDELHKHGKETAMETQLEVIKHWKRFADGRKTGPC* 401
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00180 400 FunFam Glutamate decarboxylase 1 258 - -
Pte7g00180 400 FunFam Glutamate decarboxylase 259 346 - -
Pte7g00180 400 NCBIfam glutamate decarboxylase 1 342 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte7g00180 400 Gene3D - 259 346 - -
Pte7g00180 400 PANTHER GLUTAMATE DECARBOXYLASE 1 398 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte7g00180 400 SUPERFAMILY PLP-dependent transferases 1 342 IPR015424 -
Pte7g00180 400 Gene3D - 1 258 IPR015421 GO:0003824
Pte7g00180 400 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 279 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte7g00180 Pte-Chr7 2261910 2264123 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00180 1 401 Calmodulin-binding Proteins AT5G17330 73.515 0.0 621
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00180 K01580 - qsa:O6P43_005261 658.677