Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00176 ATGGAGTACGGCGGTGGAGGTGGCTCTGGTAGTGGTGGGGACCATCACCATGATGCTTCTAGTTCTCAGGGAAGGAGGAAGCGCTACCATCGTCACACTGCTCATCAGATTCAAAGGCTTGAAGCAACCTTCAAAGAGTGTCCCCATCCAGATGAGAAGCAGAGGACTCAGTTAAGTAGGGAGTTGGGGTTAGCTCCACGGCAAATCAAATTTTGGTTTCAGAATAGGAGAACCCAGATGAAGGCTCAACATGAAAGAGCTGATAATTGCGCACTACGAGCAGAGAATGACAAGATACGATGTGAGAACATAGCAATCAGAGAGGCATTGAAAAATGTCATTTGCCCTACATGTGGTGGCCCTCCTATAAACGAAGATACTTACTTTGATGAACAAAAGTTGAGAATGGAGAATGCCCAGCTGAAAGAAGAGCTTGATAGAGTATCTAGCATTGCAGCCAAGTACATGGGAAGACCGTTTTCCCAACTTCCACCAGTTCAGCCAATTCATATATCTTCACTGGATTTGACAATGGGAAGCTTAGGACATCATGGGATTCCTGTAGGACCTTCTCTTGATCTTGATCTTCTTCCAGGCAGTTCTTCAACATTGCCAAGCTTGCCCTTTCAGCCTGCTCTCCTCTCAGACGTTGATAAGTCCCTTATGACTGATATTGCTACCAATGCAATGCAAGAACTGCTCAGGCTTCTGCAGACTAATGAACCTCTATGGATGAAGTCTAGCACCGATGGAAGGGATATCCTCAATATTGAGAACTATGAAAGAATCTTTCCGAGGAGTAATAGTCACTTGAAAAACCCCAAAATTCGAATTGAAGCTTCCAGAGATTCTGGGGTTGTAATCATGAACGGTTTGGCTTTAGTTGACATGTTCATGGATTCTGTGAGTTCGAAGTGTCTATTAATAGTTGACCACCCAGTTGCAAATTCTAGATTTACAGTTCCGGAAGGATATATGCTCATCTGTTTATTGACTTTGCAGAACAAATGGATGGATCTGTTTCCTACGATTGTGTCAATGGCAAGAACATTTGAAGTAATTTCAACTGGGATATTAGGTGGTCATAGTGGCGCTTTGCTGCTGATGTATGAAGAGGTGCAGGTACTAACACCACTTGTTCCAACGAGGGAGTTTTACTTTCTTCGTTACTGTCAGCAAATCGAGCAAGGTTCATGGGCTATTGTGAATGTTTCTTATGATTTCCCTCAAGATATCCAATTTTCTTCTCACAGCCGATCTCGGAGGCTTCCTTCTGGATGCTTGATCCAGGACATGCCCAATGGATATTCCAAGGTTACATGGGTTGAACATGTCGAAATAGAAGACAAGATGCCGGTTAATTGCCTTTACCGTGATCTGATCTATAGTGGTTTAGCATTTGGAGCAGAAAGATGGCTTCCTACTCTTCAGAGAATGTGTGAAAGATTTGCTTGTCTAATGCTGTCTAGCACATCTACTCGTGACCTTGGAGGAGTCATTCCATCTCCTGACGGCAAAAGAAGCTTGATGAAACTTGCACAAAGGATGGTGAACTATTTCTGTGCAAGCATTAGCACATCAAATGGCAATAGGTGGACAACGCTTTCGGGGTTGGACGAGACAGGTGTGAGAGTCACTATCAAAAGAAGCTCAGATCCTGGCCATTCAAATGGTATGGTGCTTAGTGCAGCAACTACAATCTGGCTACCTGTTTCCCCACAAAATGTCTTCAACTTCTTCAAGGACGAGAGAAGACGATCTCAGTGGGATGTTCTCTCCAACGGCAATTCAGTGCAAGAGGTGGCTCATATAGCAAATGGTTCACATCCTGGCAACTGTATTTCTGTCCTCAGGGCTTTCAATACAAGTCAGAACAACATGCTCATACTCCAGGAGAGCTGCATAGATTCATCAGGATCGCTTGTGGTGTATTCTCCAGTGGATTTGCCAGCAATCAACATAGCAATGAGTGGAGAAGACCCTTCCTATATTCCACTGCTACCATCAGGGTTTACTATATCCCCTTATGGTCAACCAGACCAAGATGGAGCTTCAACGAGCTCACACACGCATGGTAACTTGGGAAGGAGTGGTTCACTCATTACAGTGGCGTTTCAAATACTTGTCAGCAACTTGCCATCTGCAAAGCTGAGCTTGGAATCTGTGACAACCGTTAATAACCTCATTGGCACCACTGTGCAGCAAATAAAGTCTGCCTTGAATTGTCCCTAG 2232 0.4431 MEYGGGGGSGSGGDHHHDASSSQGRRKRYHRHTAHQIQRLEATFKECPHPDEKQRTQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNCALRAENDKIRCENIAIREALKNVICPTCGGPPINEDTYFDEQKLRMENAQLKEELDRVSSIAAKYMGRPFSQLPPVQPIHISSLDLTMGSLGHHGIPVGPSLDLDLLPGSSSTLPSLPFQPALLSDVDKSLMTDIATNAMQELLRLLQTNEPLWMKSSTDGRDILNIENYERIFPRSNSHLKNPKIRIEASRDSGVVIMNGLALVDMFMDSVSSKCLLIVDHPVANSRFTVPEGYMLICLLTLQNKWMDLFPTIVSMARTFEVISTGILGGHSGALLLMYEEVQVLTPLVPTREFYFLRYCQQIEQGSWAIVNVSYDFPQDIQFSSHSRSRRLPSGCLIQDMPNGYSKVTWVEHVEIEDKMPVNCLYRDLIYSGLAFGAERWLPTLQRMCERFACLMLSSTSTRDLGGVIPSPDGKRSLMKLAQRMVNYFCASISTSNGNRWTTLSGLDETGVRVTIKRSSDPGHSNGMVLSAATTIWLPVSPQNVFNFFKDERRRSQWDVLSNGNSVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCIDSSGSLVVYSPVDLPAINIAMSGEDPSYIPLLPSGFTISPYGQPDQDGASTSSHTHGNLGRSGSLITVAFQILVSNLPSAKLSLESVTTVNNLIGTTVQQIKSALNCP* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00176 743 CDD homeodomain 25 84 IPR001356 GO:0003677
Pte7g00176 743 Gene3D - 335 464 IPR023393 -
Pte7g00176 743 SUPERFAMILY Bet v1-like 217 483 - -
Pte7g00176 743 SMART START_1 224 482 IPR002913 GO:0008289
Pte7g00176 743 Pfam START domain 225 302 IPR002913 GO:0008289
Pte7g00176 743 Pfam START domain 337 482 IPR002913 GO:0008289
Pte7g00176 743 MobiDBLite consensus disorder prediction 1 32 - -
Pte7g00176 743 ProSiteProfiles START domain profile. 215 485 IPR002913 GO:0008289
Pte7g00176 743 SMART HOX_1 24 87 IPR001356 GO:0003677
Pte7g00176 743 SUPERFAMILY Homeodomain-like 10 83 IPR009057 -
Pte7g00176 743 SUPERFAMILY Bet v1-like 503 737 - -
Pte7g00176 743 Coils Coil 131 151 - -
Pte7g00176 743 CDD START_ArGLABRA2_like 219 481 - -
Pte7g00176 743 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 23 741 IPR042160 -
Pte7g00176 743 FunFam Homeobox-leucine zipper protein HDG1 13 99 - -
Pte7g00176 743 Pfam Homeodomain 26 81 IPR001356 GO:0003677
Pte7g00176 743 ProSitePatterns 'Homeobox' domain signature. 58 81 IPR017970 GO:0000981|GO:0006355
Pte7g00176 743 Gene3D - 12 97 - -
Pte7g00176 743 ProSiteProfiles 'Homeobox' domain profile. 23 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00176 Pte-Chr7 2241774 2245586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00176 25 743 Homeobox Transcription Factor Family AT1G73360 66.118 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte7g00176 START 2.9e-37 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00176 K09338 - tcc:18587139 1175.61