Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00175 ATGTATACTTGTACGATGTCTCTCTCTACACACAAAACTTGGTTTCAGTGCAAAAGGCGAATTTCTCGCCTTAAAGGCCCCCATCACCTGGCCCGACAGACAGTGAAGGGTTTCCTGGGATTTGCTTTCCCGGGAACCGAACACCTTCGTAGCCCCAGTTTCATCTGGTTCCCAAGCAAAGCAAGCTGTATTTCGTTGTTTTCGGGCCGCAGATTGTTCTTTTACAAACGCTGTTCGCATTGCTGTATGCGTGGTTTGAAGTGTTTTCTCATGCCGTCGGACTCTGACATCGCTGAAATGGGCGTTGATGATCAAAATGACGGAAAACAATCTAAGGCATCCGCCACAACGTGCGTTAGTCAGTTCACTGGGGATGAGCTGTCTAAGAATTTTGTTCAGTCCGAGGATACAAGTTCCATCGGGAATGTTCAGATGCCCAAGGTGAGAAAGCCGTACACTATTACTAAGCAAAGGGAAAAATGGACAGAGGAGGAGCACCAAAAGTTCCTTGAAGCCTTGAAACTGTACGGCCGTGGTTGGCGCCAAATAGAAGAATATGTAGGCACCAAAACTGCTGTTCAGATTAGAAGTCATGCTCAAAAGTTTTTCTCTAAGCTGGTGCGGGAGTCACATGGCACTGCAGAAAGCCCTATTCAACCAATTGAAATTCCACCTCCTAGGCCTAAGAGAAAACCTCTGCATCCATATCCTCGCAAGTTGGCAGATAGTTTTCAAGGAAATTGTGCTTTAAATGAGCAAGAAAGATCTCCGTCGCCTAACCTGTTGGTGGCAGAAAAAGACACTCACTCTCCGGCATCAGTTTTAACTGTGAATGGATCAGATGCATTTGGATCTTCCAGTTCTGAGCAGACTAACAGGTGTTTTTCACCAAACTCCTGTACTACCGAAATGCACTCTGTTGGCATAACGCCTATAGAAAAGGAGAATGACTACATGACATCACACTCATCTGAAGAAGAGAAAGAGTCTTTGTCCTCGGTTCCCCAATATGGTGGCACGAGTCTGGAGAACCTTGTGTCTGTGAAGTTTGAACTACTTTCCGAGGAAACTGAATCTTCTAAAGGAAATTCCACAATGGTTCAACCATCCACCATCAAGCTTTTTGGCAGGACCGTATCCATCCCAGATGTTGAGAAGCCATTGATTTCTGGTGTGGTAAATCTCAAGTCAATTGCATGTGCACCTTGTCAAGGAAATGTTGTGGTTGAAAGAGAGTGTTTTAGCATGGCCTTGGCATCCAATCATCTACATACAAAATTATCGCTTCGCTTGCCTCATAGTGATTCAAGTTCACCACCCGGTAAAGCTGACTTAAATTCCTTGGAAATCGAGCAAGAGAACACCGACAGTGTTTGCCTGCCGTTGCGGACCTTTGGCCAAGGTTTACCATCATGCTACGCGAGTAACAAAATCTTAGTTCCAAAACCTGTATATGCTTGTGCTAGAGGAACAATAGAAAATAAAGAAGCTGTGAAAGAAAGTTATTGTACTGGTTCAATCAATGAAGTAGAAAATGGTGACGAGAAATTAAATGTCGTTGACTCACAAAATCAAGGCTTTCGCGTTGAGGTTGGAATTGGTTCCCAACAATCTGTGGGTCGTGTCGGAATATGCTCTCGCAAGTTTAGCGGGGGTTTTGTGCCCTACAAAAGATGCTTCACTGAGAGAAATGCAGACTCTGCAGGTTCAGCAATGGAAGAAAGGAGTGCACAGAGAGCTCGAGTATGCTCATAG 1755 0.4479 MYTCTMSLSTHKTWFQCKRRISRLKGPHHLARQTVKGFLGFAFPGTEHLRSPSFIWFPSKASCISLFSGRRLFFYKRCSHCCMRGLKCFLMPSDSDIAEMGVDDQNDGKQSKASATTCVSQFTGDELSKNFVQSEDTSSIGNVQMPKVRKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEYVGTKTAVQIRSHAQKFFSKLVRESHGTAESPIQPIEIPPPRPKRKPLHPYPRKLADSFQGNCALNEQERSPSPNLLVAEKDTHSPASVLTVNGSDAFGSSSSEQTNRCFSPNSCTTEMHSVGITPIEKENDYMTSHSSEEEKESLSSVPQYGGTSLENLVSVKFELLSEETESSKGNSTMVQPSTIKLFGRTVSIPDVEKPLISGVVNLKSIACAPCQGNVVVERECFSMALASNHLHTKLSLRLPHSDSSSPPGKADLNSLEIEQENTDSVCLPLRTFGQGLPSCYASNKILVPKPVYACARGTIENKEAVKESYCTGSINEVENGDEKLNVVDSQNQGFRVEVGIGSQQSVGRVGICSRKFSGGFVPYKRCFTERNADSAGSAMEERSAQRARVCS* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00175 584 SUPERFAMILY Homeodomain-like 152 206 IPR009057 -
Pte7g00175 584 ProSiteProfiles Myb-like domain profile. 153 203 IPR001005 -
Pte7g00175 584 MobiDBLite consensus disorder prediction 210 234 - -
Pte7g00175 584 MobiDBLite consensus disorder prediction 317 336 - -
Pte7g00175 584 NCBIfam myb-like DNA-binding domain, SHAQKYF class 156 205 IPR006447 GO:0003677
Pte7g00175 584 ProSiteProfiles SANT domain profile. 156 207 IPR017884 -
Pte7g00175 584 PANTHER SWI/SNF COMPLEX-RELATED 140 402 - -
Pte7g00175 584 Pfam Myb-like DNA-binding domain 158 201 IPR001005 -
Pte7g00175 584 CDD SANT 160 203 IPR001005 -
Pte7g00175 584 FunFam protein REVEILLE 6 isoform X1 160 208 - -
Pte7g00175 584 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 207 IPR017930 -
Pte7g00175 584 SMART sant 157 205 IPR001005 -
Pte7g00175 584 Gene3D - 160 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00175 Pte-Chr7 2234257 2240170 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte7g00175 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00175 - - qsa:O6P43_008425 401.749