Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00173 ATGGCGCCAGTAGGATTACCTCCTGGTTTTAGGTTCCATCCTACTGACGAAGAGCTAGTGAATTACTATCTTAAAAGAAAGATCAATGGCCAAGAGATCGAACTTGACATCATTCCTGAAGTTGATCTCTACAAATGTGAACCATGGGAATTGGCAGAAAAGTCATTTCTGCCAAGTAGAGACCCAGAGTGGTACTTCTTTGGACCAAGGGATAGGAAATACCCAAATGGGTTCAGAACAAACAGAGCAACAAGAGCAGGTTATTGGAAATCTACAGGAAAAGACAGAAAGGTTACAAGCCAAAACAGACCCATTGGAATGAAAAAGACTTTGGTTTATTACAGAGGTCGTGCTCCTCAAGGAATAAGAACTGATTGGGTAATGCATGAGTACCGATTTGATGACAAAGAATATGAGGATACCTCAGGAATTCAGGATACTTATGCATTGTGTCGCGTGTTTAAGAAAAATGGAATCTGCTCTGAGATTGAAGAATTGAGGCAATGTAGTGTTCCACTAATTGAGGCCTCGCCAACCATAATTAATGAGTGTGAAACAATGTCCCCAGACATTCCAATGGCTTCATCTTCATGCATAGAAGAAGACGACAAGGATGATGCATGGATGCAGTTTATCACAGATGATGCATGGTATTCTTCTAATGCAAATATTGGTAGCGGAGAAGAAATATCTCATTTGACATTCACAAACTTTTGA 717 0.4017 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVTSQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRFDDKEYEDTSGIQDTYALCRVFKKNGICSEIEELRQCSVPLIEASPTIINECETMSPDIPMASSSCIEEDDKDDAWMQFITDDAWYSSNANIGSGEEISHLTFTNF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00173 238 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Pte7g00173 238 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 179 - -
Pte7g00173 238 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pte7g00173 238 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Pte7g00173 238 FunFam Nac domain-containing protein 86 15 159 - -
Pte7g00173 238 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00173 Pte-Chr7 2226361 2229014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00173 1 230 NAC Transcription Factor Family AT3G17730 73.577 7.69e-131 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte7g00173 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00173 - - gmx:100784495 453.366