Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00168 ATGACCTCCCAAGTAAGGGTTGAGAGAAGAGATCGGTCTAGGTTTCCTGCACAAAATGCCAGACGGGAGTGGGTTCCTAGAGGATCTACTGTTGCTGCAACTGAAAGCTCTCAGTCCAGTATCTGTTTGGAACAAAATGTCCAACATGTTGGCATTGTTGAACAGAATAGTGGGCAAGGAAGCAATATTAGTTCAAGAAGGCATCTGGGTCTTAACTTGGAGCAAAATGTTGATCATGGCGGGAGTTTGAATCATAATCTTGCTCAACAAGAGAATGGACAAAGGAGCAATTATAGTCCAAGAATTCAAAGTTTGGAGCACAATGTCAATCATGGTGGGCGCATCCTTCATACAATTTCTCAACATGATAGTAGGCAAAGAAGCAATCATTGTGTAAGAGGGTTTGCTGGTCGACCTGTGAATCGATGGAGGGAAAGGGAAAGAGAGAAGGAGAAGGAGAAGGTGAAAGGTGAGAACCAGGCTGTGAAGGTAAGGAAGGATTCTAATGTGCCTCAGCTGGTGCAGGAAATTCAGGAGAAGCTGATGAAAGGAACCGTGGAATGCATGATTTGCTATGATATGGTGAGGAGATCAGCGCCTGTTTGGTCTTGTTCAAGTTGTTACTCTATTTTCCATTTGAATTGTATAAAGAAATGGGCCAAGGCACCTACTTCTGTCGACTTGTCTGCTGAGAAGAATCAAGGTTTTAATTGGAGGTGTCCTGGTTGTCAATCTGTGCAACTAATGTCTTCGAAAGAAATTAGGTATCTTTGCTTTTGTGGGAAGAGATCAGACCCACCTTCGGATTTGTATTTGACTCCCCATTCATGTGGGGAACCGTGTGGGAAGCCATTAGAGAAGGAGATTGCAGCTGCTGGTATGAGCAAAGTAGACTTTTGTCCTCATAACTGTGTTTTACAATGTCATCCAGGTCCATGTCCTCCTTGCAAGGCATTTGCTCCACCACGTCTTTGTCCTTGTGGAAAGAAAACAATCACGACACGATGCTCGGACCGACAGTCTGTTCTCACCTGTGGCCAACTCTGTGATAAGCTTCTTGTGTGTGGCCGACATAGATGTAAGCACATTTGCCATGTTGGTCCTTGTGACAATTGCAAAGCTCCAATTAATGCCTCTTGTTTTTGCAAGAAGAAGGCAGAAACAATTCCATGTGGGGAAATGGTCGTGCAAGGGGATATCAAGGCAGAAGATGGGGTCTTTTCCTGTGATTCCACCTGTGGTAAGAAACTTAATTGTGGCAATCACATTTGCATTCAAACTTGCCATCCTGGGAGCTGTTATGAGTGTAATTTGTTACCAAGCCGGATAAATACATGTTGCTGTGGCAAGACAAGCTTGAAACAGAAACGTAACAGCTGTCTTGATCCCATACCGACCTGTTCACAGACATGTGGCAAGTCCCTTCCTTGTGGGATTCATCATTGTGGGGATGTGTGTCATATAGGTGATTGCCCACCATGCATGGTTCAGGTCTCCCAAAAGTGCCGTTGTGGTTCGACATCTCGAGATGTTGAATGTTATAAAACTACAATGGATAATGAGAAGTATACGTGTGATAGACCTTGTGGCCAGAAGAAGAACTGTGGAAGGCACCGGTGTAGTGAACGGTGTTGTCCTCTCTCCAATTCACATAATGATTACAATGGAGATTGGGATCCTCATTTTTGTTCAATGCCATGTGGAAAGAAGCTAAGATGTGGGCAGCATGCATGTGAATCCTTATGTCACAGTGGACATTGTCCACCTTGTCTTGAAACAATTTTTGGTGATTTAACTTGTGCATGTGGGAGGACTTCTATCCCTCCTCCATTGCCTTGTGGCACTCCTCCTCCTTCTTGCCAGTTGCCATGTTCCGCTCCCCAACCTTGTGGCCATCCGGCTTCCCATAGCTGCCATTTTGGAGACTGTCCACCTTGTTCAGTGCCTGTAGCAAAAGAATGCATTGGTGGCCATGTCATTCTTCGAAATATACCTTGTGGATCAAAAGACATCAGGTGCAACAAACTCTGTGGTAAAACAAGACAGTGTGGTTTGCATGCTTGTGGTAGAATTTGTCATCAACCACCTTGTGATGTGGTGGTTAATTCAGAAAATGATGTTAGAGCCTCTTGTGGGCAAATGTGTGGTGCTCCTAGAAGGGATTGCCGGCATACTTGCAAAGCTCCTTGTCACCCTTCAGCTCCCTGTCCAGATATGAGATGTGATTTTCCTGTCACGATTACTTGCTCTTGTGGTCGGATAACGGCGACCGTTCCTTGTGGTGCTGGAGGTAGCAGTGGTAACTTTAGTGGTGATACAGTATATGAATTTTCTGTAATCCAGAAATTGCCTGCCCCCCTTCAACCAATTGAATCAAATGGGAAGAAAATCCCTCTTGGGCAGAGGAAGCTGACTTGTGATGATGACTGTGCTAGACAAGAGCGTAAAAAGGTTCTTGCTGATGCTTTTGACATATCTACACCAAATCTGGATGCCCTTCACTTTGGTGATTCAGCCGCTTCTGAATTGATTGCTGACCTGTACAGACGTGATCCAAAATGGGTATTATCTGTTGAAGAGAGATGCAAGTTTTTAGTTCTCGGGAAGAGTAGGGGGATCAGTACTGGGGTAAAAGTGCATGTTTTCTGTCCTATGGTGAAAGAAAAGAGGGATGCAGTGAGGTTAATCGCTGAAAGGTGGAAGCTAGCTGTGAATGCTGCTGGTTGGGAGCCGAAGCGATTCGTTGTGGTTCATGTTACTCCAAAGTCAAAGACTCCATTAAGGGTTCTTGGGGTCAAAGGCACCTCAACAGTCAATCCACCGCATCCTCTTCAATTTGATACTTTGGTTGACATGGATCCTCGACTTGTTGTCTCGTTTCTGGACTTGCCTAGGGAAGCAGATATAAGCGCATTGGTTTTGAGATTTGGCGGTGAATGTGAACTGGTATGGTTGAACGACAAAAATGCCTTGGCAGTCTTCCACGATCCTGCTCGGGCTGCAACAGCAATGAGGAGGTTGGACCATGGATCAGTGTATCATGGGGCTGTTGTGGTCTCTCATACTGGCACAACAGCAGCAGCTTCATCCACTCATGCTTGGGGAGGAGAAACATATAAAGGGAATCCTTGGAAAAAGGCCGTGATTCAGGAGGCAAGTTGGAAAGAAGATGCTTGGGGTGAGGAAGAATTGTCAACTGGTTCTGTTGACATGCAGCCATCTGCGTGGAAGAAAGAGGCTCCCATTGCAGCTTCCTTAAACCGCTGGAGTGTCTTGGACCCAGAATCAACTCTAAGTTCTCCTGTGTCAACTGTCAAAGCCGAGAGTCCTGTGAAGCATGCAGCAAACCATGCTGTTTCACCTAATGCAGGCACTTCAAGTTCTACTGGACTTTTGAAAGATAATATCTGTGAAACAGAAAATTCTGTAGTGGACGACTGGGAAAAGGCTTATGAGTGA 3459 0.4536 MTSQVRVERRDRSRFPAQNARREWVPRGSTVAATESSQSSICLEQNVQHVGIVEQNSGQGSNISSRRHLGLNLEQNVDHGGSLNHNLAQQENGQRSNYSPRIQSLEHNVNHGGRILHTISQHDSRQRSNHCVRGFAGRPVNRWREREREKEKEKVKGENQAVKVRKDSNVPQLVQEIQEKLMKGTVECMICYDMVRRSAPVWSCSSCYSIFHLNCIKKWAKAPTSVDLSAEKNQGFNWRCPGCQSVQLMSSKEIRYLCFCGKRSDPPSDLYLTPHSCGEPCGKPLEKEIAAAGMSKVDFCPHNCVLQCHPGPCPPCKAFAPPRLCPCGKKTITTRCSDRQSVLTCGQLCDKLLVCGRHRCKHICHVGPCDNCKAPINASCFCKKKAETIPCGEMVVQGDIKAEDGVFSCDSTCGKKLNCGNHICIQTCHPGSCYECNLLPSRINTCCCGKTSLKQKRNSCLDPIPTCSQTCGKSLPCGIHHCGDVCHIGDCPPCMVQVSQKCRCGSTSRDVECYKTTMDNEKYTCDRPCGQKKNCGRHRCSERCCPLSNSHNDYNGDWDPHFCSMPCGKKLRCGQHACESLCHSGHCPPCLETIFGDLTCACGRTSIPPPLPCGTPPPSCQLPCSAPQPCGHPASHSCHFGDCPPCSVPVAKECIGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHACGRICHQPPCDVVVNSENDVRASCGQMCGAPRRDCRHTCKAPCHPSAPCPDMRCDFPVTITCSCGRITATVPCGAGGSSGNFSGDTVYEFSVIQKLPAPLQPIESNGKKIPLGQRKLTCDDDCARQERKKVLADAFDISTPNLDALHFGDSAASELIADLYRRDPKWVLSVEERCKFLVLGKSRGISTGVKVHVFCPMVKEKRDAVRLIAERWKLAVNAAGWEPKRFVVVHVTPKSKTPLRVLGVKGTSTVNPPHPLQFDTLVDMDPRLVVSFLDLPREADISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHGSVYHGAVVVSHTGTTAAASSTHAWGGETYKGNPWKKAVIQEASWKEDAWGEEELSTGSVDMQPSAWKKEAPIAASLNRWSVLDPESTLSSPVSTVKAESPVKHAANHAVSPNAGTSSSTGLLKDNICETENSVVDDWEKAYE* 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00168 1152 CDD NF-X1-zinc-finger 277 338 - -
Pte7g00168 1152 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 87 1062 IPR034078 GO:0003700
Pte7g00168 1152 ProSiteProfiles Zinc finger PHD-type profile. 185 246 IPR019787 -
Pte7g00168 1152 CDD NF-X1-zinc-finger 563 606 - -
Pte7g00168 1152 SUPERFAMILY RING/U-box 177 247 - -
Pte7g00168 1152 ProSiteProfiles Zinc finger RING-type profile. 188 244 IPR001841 -
Pte7g00168 1152 CDD NF-X1-zinc-finger 467 515 - -
Pte7g00168 1152 Pfam NF-X1 type zinc finger 419 436 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 Pfam NF-X1 type zinc finger 630 647 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 Pfam NF-X1 type zinc finger 683 698 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 Pfam NF-X1 type zinc finger 355 373 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 Pfam NF-X1 type zinc finger 477 494 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 Pfam NF-X1 type zinc finger 302 317 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 Pfam NF-X1 type zinc finger 573 590 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 Pfam NF-X1 type zinc finger 535 546 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 Pfam NF-X1 type zinc finger 715 741 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 MobiDBLite consensus disorder prediction 77 97 - -
Pte7g00168 1152 CDD NF-X1-zinc-finger 345 393 - -
Pte7g00168 1152 CDD NF-X1-zinc-finger 409 452 - -
Pte7g00168 1152 SMART znfxneu3 573 592 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 SMART znfxneu3 419 438 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 SMART znfxneu3 630 648 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 SMART znfxneu3 683 713 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 SMART znfxneu3 535 569 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 SMART znfxneu3 300 318 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 SMART znfxneu3 477 496 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 SMART znfxneu3 355 374 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 SMART znfxneu3 722 743 IPR000967 GO:0005634|GO:0008270
Pte7g00168 1152 CDD NF-X1-zinc-finger 620 668 - -
Pte7g00168 1152 CDD RING-CH-C4HC3_NFX1-like 187 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00168 Pte-Chr7 2118556 2125692 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Pte7g00168 zf-NF-X1 36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00168 K12236 - zju:107435131 1736.08