Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00165 ATGGCTCGTGGTCATTGTATCGAGAGTGTACCTGAAATGCCCCTGGTCATTAGTGATTCTGCTGAGAGTGTTAAGAAGACCAGGGATGCCCTCAAGATATTGAAGATAGTGAGTGTTTCTCCTGATGTTGACAAAGCTAAGGACAGCCATTCCATCAGACCTGGTAAAGGTAAGATGAGAAACAGGCACTATATCTCCAGGAAGGGACCCCTCATTGTTTACGGTATTGAAGGGGCCAAGCTTGTGAAGGCCTTCAGGAACATTCCTGGTGTTGAGCTCGCTCACGTTGATAGACTCAATCTGCTGAAGCTAGCTCTTGGCGGCCATCTTGGTAGATTTGTAATTTGGACCAAGACTGCTTTTGAGAAGCTGGATTCCGTTTATGGGACATTCGACAAGCCACCTGAGAAGAAGAAGGACTATGTGCTTCCTAGGGCCAAAATGGTGAACGCTGACCTGTCCAGGATCATCAATTCTGATGAGGTCCAATCTGTTGTGAAACCAATAAAGAATGAGGTTAGGAGAGCACCATTGAAGAAGAACCCACTGAAGAACCAATAA 561 0.4599 MARGHCIESVPEMPLVISDSAESVKKTRDALKILKIVSVSPDVDKAKDSHSIRPGKGKMRNRHYISRKGPLIVYGIEGAKLVKAFRNIPGVELAHVDRLNLLKLALGGHLGRFVIWTKTAFEKLDSVYGTFDKPPEKKKDYVLPRAKMVNADLSRIINSDEVQSVVKPIKNEVRRAPLKKNPLKNQ* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00165 186 Pfam 60S ribosomal protein L4 C-terminal domain 139 185 IPR025755 -
Pte7g00165 186 Pfam Ribosomal protein L4/L1 family 23 125 IPR002136 GO:0003735|GO:0005840|GO:0006412
Pte7g00165 186 Gene3D - 1 167 IPR023574 GO:0003735|GO:0005840|GO:0006412
Pte7g00165 186 PANTHER 60S RIBOSOMAL PROTEIN L4 1 185 IPR045240 -
Pte7g00165 186 SUPERFAMILY Ribosomal protein L4 1 126 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00165 Pte-Chr7 2090540 2091320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00165 1 185 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 76.216 1.91e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00165 K02930 - sind:105161410 303.908