Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00163 ATGGAGATAAATTTCTTGTGTTTGGGTACTCAAGATGGTTTAATTACCGTGGAAGAGGAAGCACATGATGAGTCGAAGGTTTCAGTGATGAGGAATTCAGGGATGCAGTGGTCATTCTCGAACAAGGTTTCTGCTGTTCCTCAGTTCCTATCTTTCAAAACTAATCAAGAAGATAGGTCCAGGAAGAACTCTCTTGATACTCTTCGTACGCATGGATATATGACCAAATCAGCTGCTGATGCTCTTGAGTCTAACCAGAAACCCCAGTCTGGGACAGTCCAGAAAAATGCTGCTAAAAATGATGCTATCAAGCATGTGGCGAGCCAATGTGGAATGACAGTGTATCCTGCAAAACAGCTTGATGTATATCCAGTTCGTTTTCAAGAAGCACGAGCAATGCCTTTCTTCAATCAGTCAAATCACACAAGTCATATTGTCCTCAGTAATTCTGTTGGCCAATCTTGTCTCGCATCCAATGGGCAGAATGTGGTAAACGCCATCATCAAGAAACAACCTCTTGGGGGTCTTCCACCCACAGCCCCTGTATCCATTCTCCCCCCTAGAGGTGCCATTGTGGGGACAACTGATCTAAGGAGCGCTTCTAAATCTGCTGGTGTACCTACTCAGTTGACGATCTTTTATGGTGGTTCAGTTTGTGTTTACAATGACATCTCTCCTGAGAAGGTTCAAGCGATTATGTTACTAGCTGGAAATGGATCTTCTCCAACTCAGAACAAGATTGTTCCCAAAGCTCAAATGCAGCCATCGGTTCCAGTGCCCTCAAACAGTGATTGCTTTGTCATAAGCAAATCCTGTTCCTCAGCACTCCCAAGTTCTTGGTCGATTTCCTCCAATGCGGGTTCTCAATCTGTGGGAGTTTCTTTTACAGTCAATGATCCACCTCAGGGGAAACCACTGTGCTCTTCTGCTTCAAATATTAACCATACGGAGCCTCCTAATATAGTCAGTTCTGTAGGAGCTGCAACTGCCTCATTGGCTCCTTCAGTAGCTTTGCCTCAGGCACGTAAAGCATCCTTGGCTCGATTTTTAGAGAAGCGCAAGGAAAGGGTCGTAAGTACGTCTCCATACCCTTTGAGCAAAAGGCCACTTGATTGCAGCACACCTGGATCTGAAAGCAATATTTTACCTGCCAATTCTTTCGGTTCTGCCCCCTTCCAGATATCAATCAGCTCTGTTAAGACATGTATTATTTAA 1215 0.4453 MEINFLCLGTQDGLITVEEEAHDESKVSVMRNSGMQWSFSNKVSAVPQFLSFKTNQEDRSRKNSLDTLRTHGYMTKSAADALESNQKPQSGTVQKNAAKNDAIKHVASQCGMTVYPAKQLDVYPVRFQEARAMPFFNQSNHTSHIVLSNSVGQSCLASNGQNVVNAIIKKQPLGGLPPTAPVSILPPRGAIVGTTDLRSASKSAGVPTQLTIFYGGSVCVYNDISPEKVQAIMLLAGNGSSPTQNKIVPKAQMQPSVPVPSNSDCFVISKSCSSALPSSWSISSNAGSQSVGVSFTVNDPPQGKPLCSSASNINHTEPPNIVSSVGAATASLAPSVALPQARKASLARFLEKRKERVVSTSPYPLSKRPLDCSTPGSESNILPANSFGSAPFQISISSVKTCII* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00163 404 ProSiteProfiles Tify domain profile. 203 238 IPR010399 -
Pte7g00163 404 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 25 376 IPR040390 -
Pte7g00163 404 Pfam Jas motif 339 363 IPR018467 -
Pte7g00163 404 SMART tify_2 203 238 IPR010399 -
Pte7g00163 404 Pfam tify domain 207 237 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00163 Pte-Chr7 2069973 2073659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00163 35 378 Tify Gene Family AT3G17860 42.582 1.15e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte7g00163 tify 3.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00163 K13464 - qsu:112010494 360.918