Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00161 ATGTCGAGGTTGGGCCCGGTAGCTGCGAATAGGAGCCTTGAAAGCTTGTTAGACATTGACAAATCAAAGGTTAAGAAATCTGAAGTTGCAGTTAGATCCCAGAAGCCTGTTCCAGGGAGTGGTCTGGAATTCAACAACCTATCCTACAGTGTCTTCAAGAAACAGAAGAAGGATGGGGTTTGGATCAAGAAAGATACTTACCTTCTCAATGAAATCTCCGGCCAAGCAATGAGAGGCCAAGTTATGGCCATCATGGGGCCAAGCGGTGCTGGCAAATCCACGTTTCTTGATGCTTTGTCTGGTAGGATTGCACGAGGAAGCCTTGAAGGATCAGTCAGAATTGATGGCGAGCCAGTGACTACAAGTTACATGAAAATGGTATCATCTTACGTGATGCAAGATGATCTTCCCTATGCTGACACTGAAGTTAGGCTTCCTCCCTCACTTACCAGAGAGGAAAAGAAGAAGAGAGTTCATCAGCTCCTTGGTCAACTTGGTTTGGAGAGTGCGGCACATACGTATATTGGAGATGAAGGAAGGAGAGCAGTATCAGGAGGAGAACGAAGAAGGGTATCTATAGGAATTGACATCATTCACATGCCATTACTTTTCCTTGATGAACCAACGTCAGGTCTTGATTCAACTGGCGCTTACAGTGTGGTAGAAAAAGTGAAGGACATTGCTCAAGGAGGGAGCATCGTCCTCTTGACCATTCATCAACCATCATACCGAATTCAAATGCTCCTCGATCGCATCACTATCCTTGCAAGGGGAAGATTAGTGTACCTGGGAACCCCACAAGAACTTCCTGATTACCTTTCAGGATTTGGAAAATCTGTACCAGATGGAGAAAATAGCTTAGAATATATCCTTGATGTGATAAAAGAGTATGAACAATCCACGATTGGCTTAGACCCCCTTGTGGCATACCAACGAGGTGGCATCAAGCCAGATGAAGTTGCCATGACCCCAGTTCCAAAGACACCTAGAACACCCCACAAAAGGACCTCAGCATCTAGAGATTCCAGACAAATGATTAGTCTGCGTAGTCAAGCTTTCTCTTCTGCAAACAATGGGACACAACTGGACTCAGCGGTTTGA 1101 0.4532 MSRLGPVAANRSLESLLDIDKSKVKKSEVAVRSQKPVPGSGLEFNNLSYSVFKKQKKDGVWIKKDTYLLNEISGQAMRGQVMAIMGPSGAGKSTFLDALSGRIARGSLEGSVRIDGEPVTTSYMKMVSSYVMQDDLPYADTEVRLPPSLTREEKKKRVHQLLGQLGLESAAHTYIGDEGRRAVSGGERRRVSIGIDIIHMPLLFLDEPTSGLDSTGAYSVVEKVKDIAQGGSIVLLTIHQPSYRIQMLLDRITILARGRLVYLGTPQELPDYLSGFGKSVPDGENSLEYILDVIKEYEQSTIGLDPLVAYQRGGIKPDEVAMTPVPKTPRTPHKRTSASRDSRQMISLRSQAFSSANNGTQLDSAV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00161 366 Pfam ABC transporter 69 210 IPR003439 GO:0005524
Pte7g00161 366 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 332 - -
Pte7g00161 366 SMART AAA_5 78 267 IPR003593 GO:0016887
Pte7g00161 366 Pfam ABC-2 type transporter 239 296 IPR043926 GO:0140359
Pte7g00161 366 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Pte7g00161 366 Gene3D - 60 274 IPR027417 -
Pte7g00161 366 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 282 IPR003439 GO:0005524
Pte7g00161 366 MobiDBLite consensus disorder prediction 319 343 - -
Pte7g00161 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 274 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00161 Pte-Chr7 2060719 2062317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00161 63 269 Calmodulin-binding Proteins AT2G36910 27.149 2.66e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00161 K05681 - qsa:O6P43_005208 520.39