Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00155 ATGGATAGTTTGCTCGGTCTTCTTAGAATCCGAGTCAAGCGTGGTGTCAACCTCGCTATTCGTGATATGAATAGCAGCGATCCTTATGTTGTGATTAAGATGGGCAGACAGAAACTTAAGACCCGTGTAATAAAGAAGGATGTTAATCCTGTGTGGAATGAAGATCTTACTCTTTCAGTGACAGATCCTGACGTTCCAATTCACCTGACTATATTTGACCATGACACTTTCACCAAGGATGATGAGATGGGAGATGCAGAATTTGAGATTCGACAATACTTAGAAGCTGTGAAGATGAATCTATCTGATCTCCCAAGTGGTACCGTAGTCTCGAGAGAACTTCCAAGTAGGTCAAACTGCCTTGCTGATGAGAGTTGCATTAGGTGGGTGGATGGCAAAGTGGTCCAAGATCTTGTGCTCAGGTTGAGAAATGTGGAATGTGGTGAAGTGGAACTTCAGTTGCAATGGATTGAGCTTCCTGGTTCCAAGGGCTTGAATCTCCCTTGA 507 0.4379 MDSLLGLLRIRVKRGVNLAIRDMNSSDPYVVIKMGRQKLKTRVIKKDVNPVWNEDLTLSVTDPDVPIHLTIFDHDTFTKDDEMGDAEFEIRQYLEAVKMNLSDLPSGTVVSRELPSRSNCLADESCIRWVDGKVVQDLVLRLRNVECGEVELQLQWIELPGSKGLNLP* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00155 168 SMART C2_3c 7 102 IPR000008 -
Pte7g00155 168 CDD C2_ArfGAP 5 148 - -
Pte7g00155 168 Gene3D C2 domain 5 164 IPR035892 -
Pte7g00155 168 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 163 IPR044562 -
Pte7g00155 168 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Pte7g00155 168 Pfam C2 domain 6 93 IPR000008 -
Pte7g00155 168 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 100 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00155 Pte-Chr7 1926697 1928855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00155 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 4.11e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00155 - - hbr:110668687 279.256