Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00145 ATGTACTCCTCTCGCAAACTTCTCTCTTCTCTCCTACGTACCTCTATTCGTCGCTCCACCAAACCCCCTCTCTCGCATTCCGATCCGAAATTTATTCTCACGCGCAACCGGACTTCTCCAACCGTGTACTTCCTCTCACGTGCCGCTCACTACGCTACCTCCGCTGCGGCGGAATCAGCTCCCCCTCAGCCAGCGAAGATTCAGCCTGCTGGGTCAAAGGGTAAGATCACGGATGAGTTCACTGGTAAGGGTGCCATCGGTCAAGTTTGTCAGGTTATTGGAGCTGTTGTCGATGTTAGGTTCAATGAAGGGTTGCCGCCCATCATGACTGCTCTTGAGGTAATGGATAATTCGATCCGTTTGGTGCTTGAGGTGGCTCAGCATTTAGGAGAGAACATGGTTAGAACCATCGCGATGGATGGTACTGAAGGGGTTGTTAGAGGACAGAGAGTTCTCAACACCGGATCACCCATCACTGTTCCAGTTGGTAGGGCTACCCTGGGTCGCATCATAAATGTTATTGGAGAGCCTATCGATGAGAAGGGCGAGATAAAAACCGAGCACTCATTGCCCATCCACAGAGAAGCTCCGGCTTTTGTTGATCAGGCAACAGAGCAACAGATTCTAGTCACTGGAATCAAGGTTGTTGATCTCCTTGCACCTTATCAAAGAGGTGGAAAGATTGGACTCTTTGGTGGTGCTGGTGTAGGAAAGACTGTCCTTATTATGGAACTCATTAACAACGTTGCTAAAGCCCATGGTGGTTTCTCTGTGTTTGCCGGTGTGGGGGAGCGAACTCGTGAGGGGAATGACTTGTACAGAGAAATGATTGAGAGTGGTGTTATTAAGCTTGGGGACAAACAGAGTGAAAGCAAGTGTGCTCTTGTATATGGGCAAATGAACGAACCTCCAGGTGCCCGTGCTCGAGTTGGACTTACTGGGTTGACCGTTGCTGAACATTTCCGTGATGCTGAAGGGCAAGATGTGCTGCTTTTTATTGATAACATTTTCCGGTTTACTCAAGCTAACTCAGAAGTGTCTGCCCTGCTTGGCCGTATCCCATCAGCTGTTGGTTACCAGCCTACCTTGGCCACTGATCTTGGAGGTCTGCAAGAGCGTATTACAACCACAAAAAAAGGCTCCATTACATCTGTCCAGGCTATTTATGTACCTGCTGATGACTTGACTGATCCAGCTCCTGCAACCACTTTCGCACATCTTGATGCTACTACTGTGCTTTCTCGGCAGATTTCTGAGCTTGGTATCTATCCTGCTGTTGATCCACTGGATTCCACATCTCGCATGCTTTCTCCTCATATTTTGGGAGATGATCACTATAATACTGCTCGTGGTGTTCAGAAAGTTCTCCAAAATTATAAGAACTTGCAAGATATTATTGCCATTCTGGGAATGGATGAGCTTAGTGAAGATGACAAACTAACGGTTACTCGGGCTCGCAAGATCCAAAGATTCTTGAGCCAGCCTTTCCATGTTGCTGAAGTTTTCACTGGAGCACCTGGAAAATATGTGGAATTAAAAGAAAGTATTTCCAGCTTCCAGGGTGTTCTTGATGGTAAATACGACGAACTTTCAGAGCAGTCCTTTTACATGGTTGGTGGAATTGATGAAGCCATTGCTAAGGCCGACAAGATAGCTAAGGAGTCTGCCTCATAG 1674 0.4731 MYSSRKLLSSLLRTSIRRSTKPPLSHSDPKFILTRNRTSPTVYFLSRAAHYATSAAAESAPPQPAKIQPAGSKGKITDEFTGKGAIGQVCQVIGAVVDVRFNEGLPPIMTALEVMDNSIRLVLEVAQHLGENMVRTIAMDGTEGVVRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDEKGEIKTEHSLPIHREAPAFVDQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGDDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVTRARKIQRFLSQPFHVAEVFTGAPGKYVELKESISSFQGVLDGKYDELSEQSFYMVGGIDEAIAKADKIAKESAS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00145 557 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 436 552 - -
Pte7g00145 557 CDD F1-ATPase_beta_CD 159 438 - -
Pte7g00145 557 FunFam ATP synthase subunit beta 158 435 - -
Pte7g00145 557 NCBIfam F0F1 ATP synthase subunit beta 86 550 IPR005722 GO:0015986|GO:0045261|GO:0046933
Pte7g00145 557 Gene3D ATP synthase, F1 beta subunit 2 51 IPR042079 -
Pte7g00145 557 FunFam ATP synthase subunit beta 75 157 - -
Pte7g00145 557 FunFam ATP synthase subunit beta 436 555 - -
Pte7g00145 557 Gene3D - 158 435 IPR027417 -
Pte7g00145 557 CDD ATP-synt_F1_beta_C 440 547 - -
Pte7g00145 557 SMART AAA_5 224 496 IPR003593 GO:0016887
Pte7g00145 557 Pfam ATP synthase alpha/beta family, beta-barrel domain 89 155 IPR004100 GO:0046034|GO:1902600
Pte7g00145 557 Gene3D - 75 157 - -
Pte7g00145 557 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 83 157 IPR036121 GO:0046034|GO:1902600
Pte7g00145 557 PANTHER ATP SYNTHASE 70 554 - -
Pte7g00145 557 ProSitePatterns ATP synthase alpha and beta subunits signature. 424 433 IPR020003 GO:0005524
Pte7g00145 557 Gene3D - 436 557 IPR024034 -
Pte7g00145 557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 439 IPR027417 -
Pte7g00145 557 Hamap ATP synthase subunit beta [atpB]. 84 551 IPR005722 GO:0015986|GO:0045261|GO:0046933
Pte7g00145 557 Pfam ATP synthase F1 beta subunit 4 47 IPR020971 GO:0000275|GO:0005524|GO:0006754|GO:0016887
Pte7g00145 557 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 212 433 IPR000194 GO:0005524
Pte7g00145 557 CDD ATP-synt_F1_beta_N 85 158 - -
Pte7g00145 557 PIRSF ATPase_subunit_beta 7 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00145 Pte-Chr7 1809625 1813266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00145 122 490 Primary Pumps ATPases(2) AT1G20260 28.354 3.26e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00145 K02133 - qsa:O6P43_005147 929.472