Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00142 ATGCCAGAGTCAGAGTTCGATGTCTCGAAGAAAGTGGCTGATAGATATCTGAAATGTGAAATCCTCGGTGAAGGTACTTTTGGGGCCGTATACAAAGCCATTGATACTAAGATGACACTAAAAGTTCTCGATGTTTGCCACAAGAAATGGGTTTTGCATAGGGATATGAAGCCAAATAATTTGTTGATAGGACCTGATGGCCAGCTTAAACTTGCTGAATTTGGGTTAGCACGGATATTTGGGAGTCCAGATTGTAGGCACTTCTCTTCTACTCCTGCACCTACTGATCTAGCCAAGCTTCGTAGACCTGCCCCTAAAAGAGATTTGAAGGGGTCTGATTTCAATGCAATCGAAAGTCCTACTGTGTTATCACCTCCTAGGAAGTCTAGAAGAGTGATGCCAGGTCGTAATGGTTTTGAAGACAAGGCACATCCTGCTGATAAAGTACATGACAGTGTAATTAATGGGAATACAGGGAATAATAAACCTGCACCAACATCAGTAGAAATTTCTATCTTTGGCTTAAGACCTCCAAATAGGCTTACAATTAACAGGTACAAATTAAACATTTAG 573 0.4101 MPESEFDVSKKVADRYLKCEILGEGTFGAVYKAIDTKMTLKVLDVCHKKWVLHRDMKPNNLLIGPDGQLKLAEFGLARIFGSPDCRHFSSTPAPTDLAKLRRPAPKRDLKGSDFNAIESPTVLSPPRKSRRVMPGRNGFEDKAHPADKVHDSVINGNTGNNKPAPTSVEISIFGLRPPNRLTINRYKLNI* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00142 190 SUPERFAMILY Protein kinase-like (PK-like) 8 92 IPR011009 -
Pte7g00142 190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Pte7g00142 190 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00142 190 PANTHER CELL DIVISION PROTEIN KINASE 37 101 - -
Pte7g00142 190 Pfam Protein kinase domain 37 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00142 190 Gene3D Transferase(Phosphotransferase) domain 1 36 146 - -
Pte7g00142 190 MobiDBLite consensus disorder prediction 90 132 - -
Pte7g00142 190 SMART serkin_6 16 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00142 Pte-Chr7 1778158 1793981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00142 37 83 Core Cell Cycle Gene Families AT1G73690 82.979 2.51e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Pte7g00142 Pkinase 5.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00142 K02202 - gmx:100776618 125.561