Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00131 ATGGCGACACCATTTTTGGGGGATGGAGGTGGAGTGGCGGTGCTCTCCACTTCTGTGAACAAAGTTGATTCATCTTCAAATGGAGACGGGGGTGGTGGAGGTAGTTCTGTTGAGTGTACGGAATTGGAGTCGCCGATTTTGATTTTCTTGTTCTTTCACAGAGCGATAAGAAATGAGCTCGATGCGCTTCACCAATTAGCTATGGAATTTGCAACCGGCGACCTTTCTGATATTAGGCCTTTGTTCGATCGGTACCATTTCCTGAGATCGGTTTACAGGCATCACTCCGATGCTGAAGATGAGGTGATCTTTCCGGCGCTTGACATACGTGTGAAGAACGTAGCACAGACATACTCTCTTGAGCACAAGGGAGAGAGTGGTCTTTTTGACCATTTATTTAAGCTGTTAACTTCTACTGTCAATAATGATGAAAGTTTTGCAAGGGAGTTGGCATCCTGCACAGGAGCTCTGCAAACGTCAGTGAGTCAGCACATGGCGAAGGAGGAGGAGCAGGTATTTCCATTGCTTATTGAGAAGTTCTCATTCGAGGAGCAAGCGTCTTTGATGTGGCAGTTCTTATGTAGTATTCCCGTTAACATGATGGCAGAATTCCTTCCATGGCTTTCTGGTTCATTATCATCCGATGAATCCCCAAATTTTAGCAAATTCTTGAGTAAGATAGTGCCAGAAGAAAAGCTGCTTCAAAAGGTTATTTTCAGTTGGATGGAAGGGAAAAATGATGCAAATACTGAAACCTGTGGAGATTGTTATACTCAAGGCCATTTTAGTCTTAGTCCATTGACACATTGTATGGATAAAGTAAACTGTGCATGTGAGTCCACAATAACAGGCAAACGGAAACATATCGAGCCGAACGCTGATATTCCTGATGCCACTGGGCTACACCCTATTGACGAAATACTGCTCTGGCATAATGCTATTAAAAAAGAACTAAATGAAATAGCAATGGAGGCCAGAAACATTCAGCTGTCTGGAGACTTTACTGATCTATCAACTTTCAATAAGAGGTTGCAGTTCATTGCTGAAGTATGCATCTTTCACAGTATTGCTGAAGACAAGATCATATTTCCTGCTGTAGATGGGGAATTGTCATTTCTCCAGGAGCATGCAGAAGAAGAAAGCCAATTTAATGAGTTCCGATGCCTCATTGAAGAAATTCAAAGTGAAGGAGCGAACTCCAATTCAGAAGCTGAGTTTTACACAAAGTTATGTTCACATGCTGATCATGTAATGAAAACAATAGAGAGGCATTTCCACAATGAGGAAGTTCAGGTTCTTCCTCTTGCTCGAAAGCACTTCAGCCACAGAAGGCAGCGCGAGCTTCTGTACCAGAGCTTATGCATGATGCCCTTGAAATTGATTGAGTGTGTCTTGCCATGGTTAGTAGGATCGTTGACTGAAGATGAAGCAAAGATGTTTCTTAAGAACATGCAATTAGCAGCTCCATCTGCTGATACTGCTCTAGTAACACTGTTTTCTGGGTGGGCATGCAAATCTCGTAATGAGGGTTTCTGTTTGTCATCAAGTTCAATGGGTTGCTGTCCTGCTAAAAGACTGACTGACATTGAAGAAGATTTCTCTCGATCATCTTGTGCATGTGCTCCTGCAATGCCATTTGGAGACTGTATGCCACAGTCAGATGTTGTTGGGAGGCCAGTGAAGCGAAATGTGACATCCTTTAGTACTAATGGCAGAAGTCCTAAACATCCTGATGCTGACCATAAGCAGAGACAATGTTGTAGTGCTCGATCCTGCTGTGTTCCAGCCTTAGGAGTGAACACTAATAATCTGGGATTAACTTCTCTTTCTAGTGCCAAGTCTTTACGCACCTTGTCTTTTAGTTCTTCTGCGCCATCTCTTAATTCTAGTCTATTTGTCTGGGAAGCAGATAACAATTCTCCTGATGTCAGACATGCAGAAAGACCTATCGATACAATTTTTAAGTTCCACAAAGCCATAAGTAAGGATTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAATGATTGTGATGAGACATTTCTTCGGCAATTTACTGGAAGGTTTCGCCTTTTATGGGGTTTGTACAGAGCACATAGTAATGCTGAAGATGATATAGTATTCCCTGCTTTGGAATCGAAAGAGGCTCTTCACAATGTCAGTCACTCGTACACGCTGGATCACAAGCAGGAGGAAAAATTATTTGAGGACATATCTCGTGTTCTCTCTGAGCTTTCACTGCTTCATGAAAGCTTTCAGATGGCACGTATATCAGCTAACTTAAGTGGGAGTAGCATTGGCATTCCAGATGCAAATCACAGTGATGACATCAGAAAGTACAATGAGCTAGCAACAAAGCTTCAAGGGATGTGTAAATCTATTAAGGTGACTTTAGATCATCATATTTTCAGGGAAGAACTTGAGCTTTGGCCATTGTTTGGGAAACATTTCACCGTGGAGGAGCAAGACAAGATTGTAGGTCGCATAATTGGGACTACTGGTGCTGAGGTTCTTCAATCAATGCTGCCATGGGTGACCTCTGCCCTTACCCAGGATGAACAAAACAAGATGATGGACACATGGAAACAGGCAACCAAGAATACCATGTTTAGCGAATGGCTTAATGATTGCTGGAAAGAAACTTCCTCATCTGAATCACAGTCTGAAGTATCAAGCGAAATTCTTTCTCAAAGAGGTAGTGGACTGCAGGAAAGCTTGGATTTGAATGATCCGATGTTCAAGCCTGGTTGGAAGGATATATTTAGAATGAATCAAAATGAGCTGGAGTCAGAGATCACAAAGGTTTACAGAGACTTAACTCTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAATCTTATGACTAGTCGTTGGATTGCTGCACAACAGAAGTTGCCCAAGACTGCTGTTAATGAAACATCTAGTGATGAAGATGTAGAAGGACGGTTACCATCATATCGAGATGCTGAGAAGCAAATTTTTGGCTGTGAGCACTACAAAAGAAACTGCAAGTTACGAGCTGCTTGTTGTGGAAAGTTATTTGCATGTAGATTTTGTCATGACAATGTGAGTGATCACTCAATGGACAGAAAGGCCACATCAGAAATGATGTGTATGCGCTGCCTAAATATCCAGCCAGTTGGACCTATATGCATGACACCTTCATGCGCTGGGTTTTCTGTGGCAAAGTATTATTGCAATATATGCAAATTCTTTGATGACGAGAGGGATGTATATCACTGCCCCTATTGCAATCTTTGCCGTGTTGGAAAGGGACTTGGAATTGATTATTTTCATTGCATGAAATGCAACTGCTGCTTGGGCATCAAATCAGGAAGTCACAGGTGCCTGGAAAAGAGTTTAGAGACGAATTGTCCAATTTGCTGCGACTTCCTCTTTACATCAAGTGCAACAGTAAGAGCTTTACCTTGTGGCCATTACATGCATTCAGCTTGCTTTCAGGCATACACATGCAGTCATTACACTTGCCCAATTTGCAGCAAATCCTTAGGAGATATGGCGGTTTATTTTGGTATGCTTGATGCTTTGTTAGCTGCTGAGGAGCTTCCAGAGGAATACAGAGACCGTTGCCAGGAGATACTATGTAATGACTGTGAACTGAAAGGCACCTCGCGCTTTCATTGGTTGTATCACAAGTGTGGATTTTGTGGGTCGTATAATACACGGGTTATCAAGAGTGAGGCCCCTAGTAGCCAATGCTAG 3723 0.4239 MATPFLGDGGGVAVLSTSVNKVDSSSNGDGGGGGSSVECTELESPILIFLFFHRAIRNELDALHQLAMEFATGDLSDIRPLFDRYHFLRSVYRHHSDAEDEVIFPALDIRVKNVAQTYSLEHKGESGLFDHLFKLLTSTVNNDESFARELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSFEEQASLMWQFLCSIPVNMMAEFLPWLSGSLSSDESPNFSKFLSKIVPEEKLLQKVIFSWMEGKNDANTETCGDCYTQGHFSLSPLTHCMDKVNCACESTITGKRKHIEPNADIPDATGLHPIDEILLWHNAIKKELNEIAMEARNIQLSGDFTDLSTFNKRLQFIAEVCIFHSIAEDKIIFPAVDGELSFLQEHAEEESQFNEFRCLIEEIQSEGANSNSEAEFYTKLCSHADHVMKTIERHFHNEEVQVLPLARKHFSHRRQRELLYQSLCMMPLKLIECVLPWLVGSLTEDEAKMFLKNMQLAAPSADTALVTLFSGWACKSRNEGFCLSSSSMGCCPAKRLTDIEEDFSRSSCACAPAMPFGDCMPQSDVVGRPVKRNVTSFSTNGRSPKHPDADHKQRQCCSARSCCVPALGVNTNNLGLTSLSSAKSLRTLSFSSSAPSLNSSLFVWEADNNSPDVRHAERPIDTIFKFHKAISKDLEYLDVESGKLNDCDETFLRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEEKLFEDISRVLSELSLLHESFQMARISANLSGSSIGIPDANHSDDIRKYNELATKLQGMCKSIKVTLDHHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFSEWLNDCWKETSSSESQSEVSSEILSQRGSGLQESLDLNDPMFKPGWKDIFRMNQNELESEITKVYRDLTLDPRRKAYLVQNLMTSRWIAAQQKLPKTAVNETSSDEDVEGRLPSYRDAEKQIFGCEHYKRNCKLRAACCGKLFACRFCHDNVSDHSMDRKATSEMMCMRCLNIQPVGPICMTPSCAGFSVAKYYCNICKFFDDERDVYHCPYCNLCRVGKGLGIDYFHCMKCNCCLGIKSGSHRCLEKSLETNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRCQEILCNDCELKGTSRFHWLYHKCGFCGSYNTRVIKSEAPSSQC* 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00131 1240 Pfam Ring finger domain 1124 1166 IPR001841 -
Pte7g00131 1240 Gene3D nmb1532 protein domain like 305 452 - -
Pte7g00131 1240 Gene3D nmb1532 protein domain like 43 194 - -
Pte7g00131 1240 ProSiteProfiles Zinc finger CHY-type profile. 989 1058 IPR008913 GO:0008270
Pte7g00131 1240 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 692 1235 - -
Pte7g00131 1240 CDD Hr-like 305 434 - -
Pte7g00131 1240 ProSiteProfiles Zinc finger CTCHY-type profile. 1061 1124 IPR017921 -
Pte7g00131 1240 CDD RING-H2_Pirh2-like 1124 1167 - -
Pte7g00131 1240 Gene3D nmb1532 protein domain like 644 908 - -
Pte7g00131 1240 SUPERFAMILY CHY zinc finger-like 988 1052 IPR037274 GO:0008270
Pte7g00131 1240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1118 1169 IPR013083 -
Pte7g00131 1240 Pfam Hemerythrin HHE cation binding domain 302 436 IPR012312 -
Pte7g00131 1240 Pfam Hemerythrin HHE cation binding domain 50 176 IPR012312 -
Pte7g00131 1240 Pfam Hemerythrin HHE cation binding domain 649 812 IPR012312 -
Pte7g00131 1240 Pfam CHY zinc finger 996 1071 IPR008913 GO:0008270
Pte7g00131 1240 Pfam Zinc-ribbon 1172 1229 IPR039512 -
Pte7g00131 1240 SUPERFAMILY RING/U-box 1124 1170 - -
Pte7g00131 1240 ProSiteProfiles Zinc finger RING-type profile. 1125 1167 IPR001841 -
Pte7g00131 1240 CDD Hr-like 651 811 - -
Pte7g00131 1240 FunFam Zinc finger protein-related isoform 1 1120 1169 - -
Pte7g00131 1240 SMART ring_2 1125 1166 IPR001841 -
Pte7g00131 1240 CDD Hr-like 48 174 - -
Pte7g00131 1240 Gene3D - 1196 1237 - -
Pte7g00131 1240 SUPERFAMILY Zinc hairpin stack 1062 1118 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00131 Pte-Chr7 1649629 1661653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00131 1 1240 C2H2 Transcription Factor Family AT3G18290 66.931 0.0 1679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00131 K16276 - qsa:O6P43_005106 1993.78