Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00127 ATGTACACTTCAAGGCAGAAAATCAGGAAAGACAACAATGCTGAACCAACAGAATTTGAAGAATCTGTTGGACAGGCATTATTTGATCTTGAGAACACTAATCAGGAGCTGACAAGTGACTTGAAAGACCTGTACATTAATTCAGCACTCCAAGTTGATGTTAGTGGGAGTCGCAAGGCTGTTGTCATCAATGTTCCCTATAGATTGAGAAAAGGTTTCAGGAAGGTTCATGTCAGGCTTGTAAGAGAGCTTGAGAAGAAATTCAGTGGCAAGGATGTCGTCCTGATTGCCACAAGAAGGATAATGAGGCCCCCAAAGAAAGGTTCTGCTGTTCAACGACCTCGCAGCCGTACTCTAACTGCAGTGCACGAGGCTATGCTGGAGGACGTTGTTTTGCCTGCTGAAATTGTTGGGAAGCGCATTAGATACCATATTGATGGATCCAAGATAATGAAGGTTAGCAAGCATGCTGCAGTTTAG 480 0.4375 MYTSRQKIRKDNNAEPTEFEESVGQALFDLENTNQELTSDLKDLYINSALQVDVSGSRKAVVINVPYRLRKGFRKVHVRLVRELEKKFSGKDVVLIATRRIMRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRIRYHIDGSKIMKVSKHAAV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00127 159 PANTHER 40S RIBOSOMAL PROTEIN S7 1 156 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pte7g00127 159 Pfam Ribosomal protein S7e 7 154 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pte7g00127 159 Coils Coil 27 47 - -
Pte7g00127 159 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00127 Pte-Chr7 1619902 1622245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00127 1 153 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 77.778 5.65e-88 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00127 K02993 - gmx:100499772 276.174