Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00117 ATGCGTCTAAGCTGTAATGGCTGTCGAGTCCTCCGTAAAGGTTGCAGTGCCAATTGCACAATCAGACCTTGTCTTCAATGGATTCAATCTCCAGATTCTCAAGCCAACGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCTGGCCTCATCAACCTCATCCATGCCGGTCTCCCACACCTCCGACCAGTGATATTCAAATCTTTGCTGTACGAATCTTGCGGTCGGATCGTGAACCCAACTTTCGGGGCAACAGGATTGTTATCATCGGGTAAATGGCACCTTTGTGAGGCCGCCGTAGAAGCCGTGCTCAAAGGTGCGCCGATAGTCCCAGCTTCCTCTGAGTCTGGTTTGAGCGGAGACGATGGCCAAGTTTTGAAAGCGTGCGATATTCGCCACGCAGTAAAAAAACTGGAGAGCTCTGGCGTGACCGATCGGCTCCACAAGATTGCCAAGCCTCGGAATCGGTTCAAACGATCGGGTCTGAAACCGAAACCGGAAGTGAACCATACGGCTAAGCCAGAAATGACATCAACGAATAACTCTGATGGGTCTTTGAGTCATGAATCAAGATTGAGTCGGAAAAATCCGACTCGGAACAGTGACGTTGGAGGGGAAGCTGACACAGACGGCGATTCAGTTGAGACCGTAGAGGCTTCTTTAGTGGTGCGGGAAGAACCAGCCGACTGTAGCGATGTGGAGCTTGAGTTGACGTTGGGGTTTGCACAGTGGGGCCCAGTGAAAGAAAGTGAACAACGTAATAAAGTTTTTGATGCTGACATGTCTCCGTGTAATTAG 798 0.51 MRLSCNGCRVLRKGCSANCTIRPCLQWIQSPDSQANATLFLAKFYGRAGLINLIHAGLPHLRPVIFKSLLYESCGRIVNPTFGATGLLSSGKWHLCEAAVEAVLKGAPIVPASSESGLSGDDGQVLKACDIRHAVKKLESSGVTDRLHKIAKPRNRFKRSGLKPKPEVNHTAKPEMTSTNNSDGSLSHESRLSRKNPTRNSDVGGEADTDGDSVETVEASLVVREEPADCSDVELELTLGFAQWGPVKESEQRNKVFDADMSPCN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00117 265 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Pte7g00117 265 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 239 - -
Pte7g00117 265 MobiDBLite consensus disorder prediction 149 214 - -
Pte7g00117 265 MobiDBLite consensus disorder prediction 172 187 - -
Pte7g00117 265 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00117 Pte-Chr7 1461345 1462725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00117 1 192 AS2 family AT3G02550 56.345 1.43e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte7g00117 LOB 3.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00117 - - qsa:O6P43_005088 291.967