LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte7g00103	ATGGATTTAGAGGAGAAGTTCCTTGCCAAAGTTTCTGCGGTTCCAAACCTATCATCCAGTGCCTATAGTACCCCTGAGAAAAATGATCATTCATATGATGCTTCAAGAAGTCCAGAACTCCTTCAAGAGTTTCTGAAATCTGGTTCAAAGAAGGGAGTTCTCCGTACATGCTGTGAAAAGGACAAAAAGAATTCCACCTCGGTTAAAGGTAGAATGACAGAAGCTAAATCAAGCAGTAGGACATCCAAGAAACAAGATGCAAAGAAAACTAGTTTAAATCCAAACAATCTGCCATCTAGGAAGCAACTTAGGAAGGGAGGAAACCCCACTCGACTTGTGTCTGCTCTGGAGCAGTCTCCTGAATTTGGAAGTTCAAACTCTTGGATATGTAAAAATTCTGCTTGTCGAGCTGTTCTGTCTTCGGAAGACACATTTTGTAAGAGATGCTCGTGCTGTATATGCCACTTGTTTGATGATAACAAGGACCCCAGTCTTTGGTTGGTATGCAGTTCTGGACCATCACTAAATGAGTCTTGTGGGTTATCTTGTCACATTGAGTGTGCTCAACAACGTGAAAGGGTAGGGGTTGTTGATCATGGGCAATTAATGCAACTAGATGGGAGTTATTGTTGTGCATCTTGTGGGAAAGTAACCGACATACTTGGATGTTGGAAAAAACAGCTGAGTATAGCAAAGGATGCTAGGCGCTTAGACGTTCTCTGTTACAGGATATACTTGAGTTACAGGCTCTTGCATGGGACCTCGAGGTTTAAAGAAATGCATGAAATTGTCAAAGATGCCAAGGCTAAATTGGAAACCGAAGTGGGTTCGTTAGATGGAGTATCTGCTAAGATGGCGCGTGGCATTGTCAGCAGACTCTCTATTGCTGGCGAGGTCCAGAAACTCTGCTCCCTTGCCATGGAGAAAGCTGATGTATTGACTGGCATTTCTAATGTGGATTTAAATTGTAGAGAGGGTTCACTTCCTGCCGCCTGCAAGTTTGTTTTTGAGGAAGTGACTTCTTCCTCTGTTATAATCATATTGATTGACACTGCAAACTCCTCAACTGAAAATATTCAGGGCTACAAGCTCTGGTATTACAAGAGTAGAGATGAGATGCCTACGAGAGATCCTGTTGGTGTTTTTTCAAGAGCTCAGAGGAGGATACTGGCATCCAATCTGCAGCCATGCACAGAATATACATTCGAGATTGTATCTTATACAGACTCTGGTGACCTAGGCCACTCGGAGACCAAGTGTTTCACTAAGAGTGTCGAGATAATTAGGAAGTGTCCCAGTTCATTAGCTGCTATAGAGCATAAAAAGGAGAATCATCATAATGGAGGCAGTCCTTCTTGTGCCAAGTTACACTCTGATTCAGCTGATTGCTCATCAGGGTTCAAGGTCCGTGAACTGGGGAAGGTTCTGCATCTTGCCTTTGCTCAGCAGCAGGGACACCTTGAAGGATTCTGCAGTGCTGATTTAAAGAAATGCTGTGGAAGAGGCAGAACCATTAAGCCTGAAACTTTTCAAGAAAAGCAGTTGCCATTGGGTTCACGAGGACTTGACTTAAATGTAGCTTCGGTACCTGATTTGAATGAAGAGCTGACTCCGCCTTTTGAGACATCAAGGGATGAGGATAATGACTGCACGTTGCAGCAGGTTGTTGAAGCAGATGATGAAGCCTTTTCTCACGACCTAAACAAGGATGGTCTAGCAAGATCGGATGGTAGTGGTGACTCTCAAACCTGGACCCAAGCTGAAGATGTTCCGGCTGTTAATTCCAAAACAGAGTTTAGGAAACGTGCAAATGAAGAGATACATGATTGTGACAGTACTTTGATAATTGGTTCACCCTTCCATGCCAGTGATAGTTCATGTTCTTTGGATGAGAACTTCGAATACTGTGTGAAGACGATTCGTTGGCTAGAATGTGAGGGACACATCAAGCAGGAATTTAGATTGAAGTTGCTGACATGGTTTAGCTTGAGATCAACTGAGCAAGAACGCAGAGTGGTTCACACCTTTATTCAAACTCTCGTTGATGATCCTAGTAGCTTGGCAGGACAATTGTTCGACTCATTTTCAGACATCATATCCAGCAAGAAGCCACGCAGTGCATTCTGCAATAAGCTGTGGCATTAA	2145	0.4336	MDLEEKFLAKVSAVPNLSSSAYSTPEKNDHSYDASRSPELLQEFLKSGSKKGVLRTCCEKDKKNSTSVKGRMTEAKSSSRTSKKQDAKKTSLNPNNLPSRKQLRKGGNPTRLVSALEQSPEFGSSNSWICKNSACRAVLSSEDTFCKRCSCCICHLFDDNKDPSLWLVCSSGPSLNESCGLSCHIECAQQRERVGVVDHGQLMQLDGSYCCASCGKVTDILGCWKKQLSIAKDARRLDVLCYRIYLSYRLLHGTSRFKEMHEIVKDAKAKLETEVGSLDGVSAKMARGIVSRLSIAGEVQKLCSLAMEKADVLTGISNVDLNCREGSLPAACKFVFEEVTSSSVIIILIDTANSSTENIQGYKLWYYKSRDEMPTRDPVGVFSRAQRRILASNLQPCTEYTFEIVSYTDSGDLGHSETKCFTKSVEIIRKCPSSLAAIEHKKENHHNGGSPSCAKLHSDSADCSSGFKVRELGKVLHLAFAQQQGHLEGFCSADLKKCCGRGRTIKPETFQEKQLPLGSRGLDLNVASVPDLNEELTPPFETSRDEDNDCTLQQVVEADDEAFSHDLNKDGLARSDGSGDSQTWTQAEDVPAVNSKTEFRKRANEEIHDCDSTLIIGSPFHASDSSCSLDENFEYCVKTIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVHTFIQTLVDDPSSLAGQLFDSFSDIISSKKPRSAFCNKLWH*	715

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte7g00103	714	CDD	FN3	333	422	IPR003961	GO:0005515
	Pte7g00103	714	MobiDBLite	consensus disorder prediction	62	107	-	-
	Pte7g00103	714	ProSiteProfiles	Fibronectin type-III domain profile.	328	427	IPR003961	GO:0005515
	Pte7g00103	714	MobiDBLite	consensus disorder prediction	14	37	-	-
	Pte7g00103	714	SUPERFAMILY	Fibronectin type III	334	413	IPR036116	GO:0005515
	Pte7g00103	714	Gene3D	Immunoglobulins	329	426	IPR013783	-
	Pte7g00103	714	Pfam	PHD - plant homeodomain finger protein	130	248	IPR032881	-
	Pte7g00103	714	MobiDBLite	consensus disorder prediction	88	103	-	-
	Pte7g00103	714	MobiDBLite	consensus disorder prediction	14	28	-	-
	Pte7g00103	714	PANTHER	VIN3-LIKE PROTEIN 2-RELATED	18	714	IPR044514	GO:0010048\|GO:0040029

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte7g00103	Pte-Chr7	1148026	1152977	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte7g00103	127	707	PHD Gene Family	AT3G24440	48.904	5.27e-180	525

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte7g00103	-		-	zju:107431859	1045.42

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