Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00103 ATGGATTTAGAGGAGAAGTTCCTTGCCAAAGTTTCTGCGGTTCCAAACCTATCATCCAGTGCCTATAGTACCCCTGAGAAAAATGATCATTCATATGATGCTTCAAGAAGTCCAGAACTCCTTCAAGAGTTTCTGAAATCTGGTTCAAAGAAGGGAGTTCTCCGTACATGCTGTGAAAAGGACAAAAAGAATTCCACCTCGGTTAAAGGTAGAATGACAGAAGCTAAATCAAGCAGTAGGACATCCAAGAAACAAGATGCAAAGAAAACTAGTTTAAATCCAAACAATCTGCCATCTAGGAAGCAACTTAGGAAGGGAGGAAACCCCACTCGACTTGTGTCTGCTCTGGAGCAGTCTCCTGAATTTGGAAGTTCAAACTCTTGGATATGTAAAAATTCTGCTTGTCGAGCTGTTCTGTCTTCGGAAGACACATTTTGTAAGAGATGCTCGTGCTGTATATGCCACTTGTTTGATGATAACAAGGACCCCAGTCTTTGGTTGGTATGCAGTTCTGGACCATCACTAAATGAGTCTTGTGGGTTATCTTGTCACATTGAGTGTGCTCAACAACGTGAAAGGGTAGGGGTTGTTGATCATGGGCAATTAATGCAACTAGATGGGAGTTATTGTTGTGCATCTTGTGGGAAAGTAACCGACATACTTGGATGTTGGAAAAAACAGCTGAGTATAGCAAAGGATGCTAGGCGCTTAGACGTTCTCTGTTACAGGATATACTTGAGTTACAGGCTCTTGCATGGGACCTCGAGGTTTAAAGAAATGCATGAAATTGTCAAAGATGCCAAGGCTAAATTGGAAACCGAAGTGGGTTCGTTAGATGGAGTATCTGCTAAGATGGCGCGTGGCATTGTCAGCAGACTCTCTATTGCTGGCGAGGTCCAGAAACTCTGCTCCCTTGCCATGGAGAAAGCTGATGTATTGACTGGCATTTCTAATGTGGATTTAAATTGTAGAGAGGGTTCACTTCCTGCCGCCTGCAAGTTTGTTTTTGAGGAAGTGACTTCTTCCTCTGTTATAATCATATTGATTGACACTGCAAACTCCTCAACTGAAAATATTCAGGGCTACAAGCTCTGGTATTACAAGAGTAGAGATGAGATGCCTACGAGAGATCCTGTTGGTGTTTTTTCAAGAGCTCAGAGGAGGATACTGGCATCCAATCTGCAGCCATGCACAGAATATACATTCGAGATTGTATCTTATACAGACTCTGGTGACCTAGGCCACTCGGAGACCAAGTGTTTCACTAAGAGTGTCGAGATAATTAGGAAGTGTCCCAGTTCATTAGCTGCTATAGAGCATAAAAAGGAGAATCATCATAATGGAGGCAGTCCTTCTTGTGCCAAGTTACACTCTGATTCAGCTGATTGCTCATCAGGGTTCAAGGTCCGTGAACTGGGGAAGGTTCTGCATCTTGCCTTTGCTCAGCAGCAGGGACACCTTGAAGGATTCTGCAGTGCTGATTTAAAGAAATGCTGTGGAAGAGGCAGAACCATTAAGCCTGAAACTTTTCAAGAAAAGCAGTTGCCATTGGGTTCACGAGGACTTGACTTAAATGTAGCTTCGGTACCTGATTTGAATGAAGAGCTGACTCCGCCTTTTGAGACATCAAGGGATGAGGATAATGACTGCACGTTGCAGCAGGTTGTTGAAGCAGATGATGAAGCCTTTTCTCACGACCTAAACAAGGATGGTCTAGCAAGATCGGATGGTAGTGGTGACTCTCAAACCTGGACCCAAGCTGAAGATGTTCCGGCTGTTAATTCCAAAACAGAGTTTAGGAAACGTGCAAATGAAGAGATACATGATTGTGACAGTACTTTGATAATTGGTTCACCCTTCCATGCCAGTGATAGTTCATGTTCTTTGGATGAGAACTTCGAATACTGTGTGAAGACGATTCGTTGGCTAGAATGTGAGGGACACATCAAGCAGGAATTTAGATTGAAGTTGCTGACATGGTTTAGCTTGAGATCAACTGAGCAAGAACGCAGAGTGGTTCACACCTTTATTCAAACTCTCGTTGATGATCCTAGTAGCTTGGCAGGACAATTGTTCGACTCATTTTCAGACATCATATCCAGCAAGAAGCCACGCAGTGCATTCTGCAATAAGCTGTGGCATTAA 2145 0.4336 MDLEEKFLAKVSAVPNLSSSAYSTPEKNDHSYDASRSPELLQEFLKSGSKKGVLRTCCEKDKKNSTSVKGRMTEAKSSSRTSKKQDAKKTSLNPNNLPSRKQLRKGGNPTRLVSALEQSPEFGSSNSWICKNSACRAVLSSEDTFCKRCSCCICHLFDDNKDPSLWLVCSSGPSLNESCGLSCHIECAQQRERVGVVDHGQLMQLDGSYCCASCGKVTDILGCWKKQLSIAKDARRLDVLCYRIYLSYRLLHGTSRFKEMHEIVKDAKAKLETEVGSLDGVSAKMARGIVSRLSIAGEVQKLCSLAMEKADVLTGISNVDLNCREGSLPAACKFVFEEVTSSSVIIILIDTANSSTENIQGYKLWYYKSRDEMPTRDPVGVFSRAQRRILASNLQPCTEYTFEIVSYTDSGDLGHSETKCFTKSVEIIRKCPSSLAAIEHKKENHHNGGSPSCAKLHSDSADCSSGFKVRELGKVLHLAFAQQQGHLEGFCSADLKKCCGRGRTIKPETFQEKQLPLGSRGLDLNVASVPDLNEELTPPFETSRDEDNDCTLQQVVEADDEAFSHDLNKDGLARSDGSGDSQTWTQAEDVPAVNSKTEFRKRANEEIHDCDSTLIIGSPFHASDSSCSLDENFEYCVKTIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVHTFIQTLVDDPSSLAGQLFDSFSDIISSKKPRSAFCNKLWH* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00103 714 CDD FN3 333 422 IPR003961 GO:0005515
Pte7g00103 714 MobiDBLite consensus disorder prediction 62 107 - -
Pte7g00103 714 ProSiteProfiles Fibronectin type-III domain profile. 328 427 IPR003961 GO:0005515
Pte7g00103 714 MobiDBLite consensus disorder prediction 14 37 - -
Pte7g00103 714 SUPERFAMILY Fibronectin type III 334 413 IPR036116 GO:0005515
Pte7g00103 714 Gene3D Immunoglobulins 329 426 IPR013783 -
Pte7g00103 714 Pfam PHD - plant homeodomain finger protein 130 248 IPR032881 -
Pte7g00103 714 MobiDBLite consensus disorder prediction 88 103 - -
Pte7g00103 714 MobiDBLite consensus disorder prediction 14 28 - -
Pte7g00103 714 PANTHER VIN3-LIKE PROTEIN 2-RELATED 18 714 IPR044514 GO:0010048|GO:0040029
Pte7g00103 714 MobiDBLite consensus disorder prediction 567 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00103 Pte-Chr7 1148026 1152977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00103 127 707 PHD Gene Family AT3G24440 48.904 5.27e-180 525