Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00084 ATGTCAACGTCGCCGTCTCCCGGAGCTGCTCCAGCTCCCACTTCACCACCGGCACCGCCTGCCAATTCTACTGCGTCTCCTCCACCAGCGACTCCATCAGCGCCCCCTCCATCTACTCCGTCTCCGCCGCCTCCTTCTTCTGCCTCGCCACCCCCTTCAACCCCATCAACTCCTCCTAATTCTAGTTCACCCACTCCACCTGCGTCGACCCCTCCATCGACGCCGTCGGTTCCATCAAAATCGCCTCCGTCCATTCCGAATAGTCCTCCTACTCCTGCTGTGGGTGGATCCCCACCCGCTCCATCCAGTCCTAAAACGCCTTCTACTCCCAACGGTGGTTCCCCCTCCACCCCAACGCCTTCTTCCTCTAGTGTGCCCACTGGCCTTATCGTGGGAGTTGCAGTGGGTGCGGTTGCGGTACTGTTAGTGTTTAGTATTCTCTGCATTTGTTGTAGGAAGAAGAGAAGGAGACGCGATGAGCAATACATGCCTCCACACCCGCCTGTTGCTACTGGACGTAAAGATAACGGTTATGGTGGTGGTCTTCAACATTGGCAACAAAGTGCTAACCCTCCTGCTGATCATGTCGTGACGATGCCACCAAAGCCATCTCCTCCACCACATCCACCATCACATACTCCTAAGCCTCCACCACCGCCACCAGCAGCTTTCATAAGCAGCAGTGGAGGTTCTGACACAAATCATTCAGGGTCTGAAACTCCCTTGCCACCTCCTTCTCCTGGCATTGCGTTTGGTTTCTCAAAGAGCACATTTACGTACGATGAATTGGCCAAGGCAACAGATGGCTTTTCTGATGCTAACCTGTTAGGACAAGGTGGTTTTGGGTATGTGCACAGAGGGATTTTGCCAAATGGAAAGGAAATAGCTGTCAAGCAACTGAAATCTGGAAGTGGACAGGGTGAGCGTGAATTCCAGGCAGAAGTAGAGATAATTAGTCGAGTGCATCATAGACATCTTGTGTCATTGGTGGGATACTGTAATACTGGAACGCAGAGGCTGCTCGTATATGAGTTTGTTCCTAACAATACTTTGGAGTTCCACTTACATGGAAAGGGTAGACCAACTATGGAATGGCCCACAAGGTTGAAAATTGCTTTAGGATCTGCAAGGGGACTGGCATATCTTCATGAGGATTGTCATCCGAAAATCATTCACCGGGATATAAAGGCTGCTAACATACTTCTGGATTTCAAGTTTGAAGCTAAGGTTGCGGATTTTGGACTGGCTAAGTTTTCTTCTGATCTCAACACACATATCTCTACTCGTGTAATGGGAACTTTTGGGTACTTGGCTCCAGAATATGCGTCAACTGGTAAACTCACGGACAGATCAGATGTTTTCTCCTTTGGGGTTGTGCTTTTGGAATTAATTACTGGCCGCCGTCCAGTTGATACAAGTAATTCTTTCATGGAAGATAGCTTGGTGGACTGGGCAAGACCGTTGCTCTCACGAGCTTTGGAAGATCAAAACTTTGATTCTTTAGTTGATCCAAGGCTGCAGCATGATTATAACCACAGTGAGATGGCTCGCATGGTTGCTTGTGCTGCAGCTTGTGTACGGCACTCAGCACGACGCCGGCTACGAATGAGCCAGGTGGTCCGCGCTCTGGAAGGAGACGTGTCTTTGGCTGATCTTAGTGAAGGAATTAGACCTGGACATAGCACTGTTTATAGTTCTCAGGGAAGCACTGATTATGATACAGCACAATACAACGAAGACATGAAAAAGTTCAGAAAGATGGCACTGGGAAGCCAAGAGTATGGTGGCAGTGGTGAGTACAGTGAAGCAACCAGTGAGTACGGTTTGTATCCTTCAGGTTCCAGCAGTGAAAGTCGAAACACAAGGGAACTGGACGTGAAAAAAATGAAAAACAGTCAAGGTTTCAATGGAAACTCGTAG 1920 0.4917 MSTSPSPGAAPAPTSPPAPPANSTASPPPATPSAPPPSTPSPPPPSSASPPPSTPSTPPNSSSPTPPASTPPSTPSVPSKSPPSIPNSPPTPAVGGSPPAPSSPKTPSTPNGGSPSTPTPSSSSVPTGLIVGVAVGAVAVLLVFSILCICCRKKRRRRDEQYMPPHPPVATGRKDNGYGGGLQHWQQSANPPADHVVTMPPKPSPPPHPPSHTPKPPPPPPAAFISSSGGSDTNHSGSETPLPPPSPGIAFGFSKSTFTYDELAKATDGFSDANLLGQGGFGYVHRGILPNGKEIAVKQLKSGSGQGEREFQAEVEIISRVHHRHLVSLVGYCNTGTQRLLVYEFVPNNTLEFHLHGKGRPTMEWPTRLKIALGSARGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDLNTHISTRVMGTFGYLAPEYASTGKLTDRSDVFSFGVVLLELITGRRPVDTSNSFMEDSLVDWARPLLSRALEDQNFDSLVDPRLQHDYNHSEMARMVACAAACVRHSARRRLRMSQVVRALEGDVSLADLSEGIRPGHSTVYSSQGSTDYDTAQYNEDMKKFRKMALGSQEYGGSGEYSEATSEYGLYPSGSSSESRNTRELDVKKMKNSQGFNGNS* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00084 639 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Pte7g00084 639 SMART serkin_6 270 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00084 639 FunFam proline-rich receptor-like protein kinase PERK1 248 345 - -
Pte7g00084 639 Gene3D Transferase(Phosphotransferase) domain 1 346 552 - -
Pte7g00084 639 PRINTS Proline rich extensin signature 4 16 - -
Pte7g00084 639 PRINTS Proline rich extensin signature 16 37 - -
Pte7g00084 639 PRINTS Proline rich extensin signature 37 53 - -
Pte7g00084 639 PRINTS Proline rich extensin signature 54 71 - -
Pte7g00084 639 MobiDBLite consensus disorder prediction 1 124 - -
Pte7g00084 639 CDD STKc_IRAK 276 545 - -
Pte7g00084 639 SUPERFAMILY Protein kinase-like (PK-like) 245 543 IPR011009 -
Pte7g00084 639 MobiDBLite consensus disorder prediction 196 224 - -
Pte7g00084 639 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 136 602 IPR047117 -
Pte7g00084 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Pte7g00084 639 FunFam Proline-rich receptor-like protein kinase PERK1 346 554 - -
Pte7g00084 639 ProSiteProfiles Protein kinase domain profile. 270 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00084 639 MobiDBLite consensus disorder prediction 9 114 - -
Pte7g00084 639 Pfam Protein tyrosine and serine/threonine kinase 275 543 IPR001245 GO:0004672|GO:0006468
Pte7g00084 639 Gene3D Phosphorylase Kinase; domain 1 248 345 - -
Pte7g00084 639 MobiDBLite consensus disorder prediction 160 250 - -
Pte7g00084 639 MobiDBLite consensus disorder prediction 593 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00084 Pte-Chr7 982776 987369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00084 60 623 Trihelix Transcription Factor Family AT1G70460 49.391 3.09e-169 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte7g00084 PK_Tyr_Ser-Thr 4.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00084 - - qsa:O6P43_007923 776.548