Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00080 ATGTCATCACTCCCTGTCCTCTCTCAACTTCATTTACAGCAGCTGCAAAATCCAAACTTGAACAATACACATCTCTTCAAACCCTTGATAACCGAAAATTTGGCAGCTTTCAATCCAAGATATCCCAAAGTTTTGAGCTTTCATCTCCTCAAATATAGAAACGACTTTCAAAAAGTATGCTGCAAGGTTCTCAAGGATCCTAAGGAAGAACCTATGGCAGAGTTTAGCTCATCTAGCGGTGATGATGATGGAGGAGGAGGAGAAGGAGGAGGTCGTGGTGACGATGGGGATGATGGGCAAGTGGAGAAGAAAGATGGATCTTCTGGAATTCTCCCAAAGTCCTTGAATTTCACTGCTGATGATGCCAAAACTGTCTTCGTAGCGTTGGCAATATCGTTTGCATTTCGTTCTTTCGTGGCAGAGCCTAGGTACATTCCTTCGCTGTCCATGTATCCTACATTTGATGTTGGAGATCGACTTGTTGCTGAGAAGGTTACCTACTACTTTAGAAAGCCATGTGTTAATGACATTGTCATATTTAAAAGCCCTCCAGTTCTCCAAGAAGTTGGATATTCTGATGACGATGTTTTCATAAAACGTATAGTTGCCAAAGAAGGTGACGTTGTGGAGGTTCATAACGGAAAAGTTATCGTCAATGGGATTCAGAGAAATGAGACTTTTATTCTGGAACCACCAGGGTATGAAATGGATCCAGTGCGCGTACCAGAGAACTATGTGTTCGTGATGGGTGACAACCGCAATAATAGCTACGACTCACATGTGTGGGGTCCATTGCCAGCAAAAAATATTATAGGCAGATCAGTATTGCGTTACTGGCCACCAAACAGGGTGGGTGGTACAGTTTCTGAGGAAGCATGTCCATCTGAAACCAGTCCAGCTTCTCAATGA 909 0.4323 MSSLPVLSQLHLQQLQNPNLNNTHLFKPLITENLAAFNPRYPKVLSFHLLKYRNDFQKVCCKVLKDPKEEPMAEFSSSSGDDDGGGGEGGGRGDDGDDGQVEKKDGSSGILPKSLNFTADDAKTVFVALAISFAFRSFVAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRKPCVNDIVIFKSPPVLQEVGYSDDDVFIKRIVAKEGDVVEVHNGKVIVNGIQRNETFILEPPGYEMDPVRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVLRYWPPNRVGGTVSEEACPSETSPASQ* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00080 302 SUPERFAMILY LexA/Signal peptidase 136 286 IPR036286 -
Pte7g00080 302 Pfam Signal peptidase, peptidase S26 122 279 IPR019533 GO:0004252|GO:0006465
Pte7g00080 302 ProSitePatterns Signal peptidases I serine active site. 147 154 IPR019756 GO:0004252|GO:0016020
Pte7g00080 302 Gene3D Umud Fragment, subunit A 135 292 - -
Pte7g00080 302 ProSitePatterns Signal peptidases I signature 3. 246 259 IPR019758 GO:0004252|GO:0016020
Pte7g00080 302 MobiDBLite consensus disorder prediction 87 104 - -
Pte7g00080 302 PANTHER SIGNAL PEPTIDASE I 109 285 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte7g00080 302 FunFam Peptidase/ serine-type peptidase 147 278 - -
Pte7g00080 302 PRINTS Bacterial leader peptidase 1 (S26A) family signature 197 209 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte7g00080 302 PRINTS Bacterial leader peptidase 1 (S26A) family signature 241 260 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte7g00080 302 PRINTS Bacterial leader peptidase 1 (S26A) family signature 138 154 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pte7g00080 302 MobiDBLite consensus disorder prediction 70 107 - -
Pte7g00080 302 CDD S26_SPase_I 141 273 IPR019533 GO:0004252|GO:0006465
Pte7g00080 302 NCBIfam signal peptidase I 123 281 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00080 Pte-Chr7 956159 959316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00080 150 280 MADS-box Gene Family AT1G29960 30.303 2.38e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00080 K03100 - qsa:O6P43_004025 379.793