Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00073 ATGGAGGAAGGTGAAGGAGGAGATTTCGCTCCAAAGAATGTCCAATCGGATAGCAATGTAACATCGGAGGCGGAGGCGGCTTTGCCTTCCGAGGCTCCTGCAAGGAAGCTGGTGAGGCATCTGGATTTCACAGCCTATGACGGGGTGGTGGCGAACGTGGCTTTACAAGAACAGCAACAACTTCAGCCTCCGCCAAAGTCTCAGTCTCACATGACTGTGCAAAGTCATCAGCCAAGGCAACGGCCAAACCTGCAGCCCCAAATACAGACATTGCCTCAGCAGCAAGTGGTGATGGTGCCAATGGCAGCACAACCTGCACATCCTCTGGCAAGGGTTGGAAAACAAGAGTCTCCAAAATCAAGATCACGGCCTAACTTTGATTTAAAAGAGGGGACTCCAAAGAAGAAAAAACAGTGCAATTGTAAACACTCAAAATGCCTAAAATTATATTGTGAATGTTTTGCATCAGGAATATACTGTGATGGATGCAATTGTACAAATTGTTGCAACAATGTTGAAAACGAAGCTGCAAGACGAGAAGCTGTAGAAGCTACCTTGGAGCGCAATCCAGATGCGTTTCGGCCGAAAATTGCAAGCAGCCCACATGGAACACGTGATATTAGGGAGGATCCTAGGGACACTTTAATCTTGGGAAAACATAATAAAGGATGCCACTGCCGGAAATCAGGATGTCTGAAGAAATACTGCGAGTGCTTTCAGGGCAACATTCTTTGCTCTGAAAATTGTAAATGCATTGACTGCAAGAATTATGAGGGAAGTGAAGAAAGACAGGCTCTATTCCATGGAGATCAAAATAACAACATGGCATATATTCAACAGGCAGCCAATGCTGCCATAACTGGAGCGATAGGATCCTCTGGTTTTACTTCGCCTCCAGCCAGAAGAAGGAAAGGTCAGGAGCTTTTCTTTGGGTCCATGACCAAGGATCCATCCTTTTGCGGGCTTGGTCCCTTTCAGCAGGTAAACCATCCGAGAGCACCTCTACCGTCTTCATCCATACTGTCAACACCAGGGACTCAAGTTGGTGCTGCAAACTTGGGTCCATCAAAAGGTACATACAGATCTTTGTTAGCAGACATCATTCAACCACAGCACTTGAAGGAGATTTGTTCAGTTATGGTATTGGCATCAGACCAAGCAGCAAAAGCAGCTGCAGAACAGAAAATTTCAACAGAAAAGCAGAGAGAAGATCAGAAAGAAACTTTGCTTGCTTCTTCAACTAAGGAGCAATTGAAGAGCCAAACTGAAGCTGAAGCTGATGCTGAGAAAGCAGTCACTAATGATTGTTCAGAGTTAGACCAGGTAGACAAAATCAGCCCAGTTAATTCCAGCTCAGATGGTGCTGATGCCCCAAAGGAAAGGCCAATGTCTCCTGGAACTTTAGCTTTAATGTGTGATGAGGAAGAGACAATGTTCATGAGCACAGCTTCCCCCAACAGTTTGAGGACTCATGCCTGCAACAACACATCTTCACATTTGCCTAATGGGCAAGGCACGACAGAGGTTTATGCAGACCAAGAAAGAGTCGTCTTGATTGCATTCAGAGATTTCCTGAATAGGCTGATCACTGTGGGAGAAATAAATGAGACGAAGTGTTCTTCTCTAGCAAGAAGTGAATCCGATTCTCAAAAGGATCGAGACAACAATGGCCAAGGGAATGCTGCTGATTCTCAAATGGTGTTGCAGGCTACTACCGGTAATGGTGCTGCAAAACCTGTCGTACCATCCACAGCAACGACTAATTGTAACATGATTACAACATCAACTTCAATTCCAAGCAATCCTGTTTCTGAAAATGGGGAAAGTAAGCCAAAGGCTGAAAAGGAAATGTAG 1854 0.4515 MEEGEGGDFAPKNVQSDSNVTSEAEAALPSEAPARKLVRHLDFTAYDGVVANVALQEQQQLQPPPKSQSHMTVQSHQPRQRPNLQPQIQTLPQQQVVMVPMAAQPAHPLARVGKQESPKSRSRPNFDLKEGTPKKKKQCNCKHSKCLKLYCECFASGIYCDGCNCTNCCNNVENEAARREAVEATLERNPDAFRPKIASSPHGTRDIREDPRDTLILGKHNKGCHCRKSGCLKKYCECFQGNILCSENCKCIDCKNYEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGFTSPPARRRKGQELFFGSMTKDPSFCGLGPFQQVNHPRAPLPSSSILSTPGTQVGAANLGPSKGTYRSLLADIIQPQHLKEICSVMVLASDQAAKAAAEQKISTEKQREDQKETLLASSTKEQLKSQTEAEADAEKAVTNDCSELDQVDKISPVNSSSDGADAPKERPMSPGTLALMCDEEETMFMSTASPNSLRTHACNNTSSHLPNGQGTTEVYADQERVVLIAFRDFLNRLITVGEINETKCSSLARSESDSQKDRDNNGQGNAADSQMVLQATTGNGAAKPVVPSTATTNCNMITTSTSIPSNPVSENGESKPKAEKEM* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00073 617 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 222 257 IPR005172 -
Pte7g00073 617 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 136 171 IPR005172 -
Pte7g00073 617 MobiDBLite consensus disorder prediction 540 561 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 107 137 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 420 437 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 439 453 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 1 34 - -
Pte7g00073 617 ProSiteProfiles CRC domain profile. 135 259 IPR005172 -
Pte7g00073 617 PANTHER TESMIN/TSO1-RELATED 58 534 IPR028307 -
Pte7g00073 617 MobiDBLite consensus disorder prediction 574 617 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 574 607 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 394 465 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 395 410 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 60 82 - -
Pte7g00073 617 MobiDBLite consensus disorder prediction 114 137 - -
Pte7g00073 617 SMART CXC_2 219 260 IPR033467 -
Pte7g00073 617 SMART CXC_2 134 174 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00073 Pte-Chr7 904039 909280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00073 2 544 CPP Transcription Factor Family AT4G29000 53.546 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte7g00073 TCR 7.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00073 - - qsa:O6P43_007909 763.837