Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00070 ATGAATCAATGTTGTGTATTTCTCTGTCTGCTTCTTAATGTATTTGTCTTCCATATCAAAGGGCAATCTACTGAAGAGGCACCTCCAAGAGATGCAGGCAATGGCTTTCAACCAAGCCTTGCTGTTGTCATAGGAATCCTCTGTATCATGTTTTCTCTGACATTCATCCTTCTGATTTATGCAAAACTGTGCCACAGGTATCATTCAGCTGCCCAAACGGATGTCGAAAATCATCCAAGGCTTCTACAACCGAGGTCTAGATTCTCAGGTTCAGGGATTGACAAGAACATTATAGAATCTCTTCCTTTTTTTAAATTTTCTAGGCTGAGAGGTACGAGGGAAGGCCTAGAATGTGCAGTATGCTTATCTAAATTTGAAGATATCGAAATCCTCAGGTTGCTGCCTAAGTGCAAGCATGCCTTCCATATCAATTGTATTGACCATTGGCTTGAATCACACTCAAGCTGTCCTCTTTGCAGACAAAAGGTCAGTGCAGAGGATCCTACACTCTTTACATACTCAAACAGCTTGAGGTTCTTGTCTAATCCATCAGAACCAAGGGAGGATTCCAGCATAGAACTTTTTGTCCAAAGAGAGGAAACACAAGAGGGTGGTTCTTCAAGATTCTGCGTTGGAAGCAGCTTTCGGAAATTTGAGAAGGGTGGTAATCAAGATGCGGATTCACTGATACGGAAAGAAGCGAAGTATGATCTCGACTATGACGGAAAATTGATGCATAAACATTATCATAGGATTGTTGTGTCTGATATTATTTTCAAGCACAGATGGAGCAGCGTCTGCTCTTCAGACATGATGTTCTTGAATCTTGAGATGCTTAACGCTATGTCAAGCAATAGATTCGATTCCATGGACTCCAGTAATGAGCATACGTCAATAGTGAGTGAGGAATTCCAGAATATCAAAAATGTTGAAAGGAAAAGATTGCTTGAAAGTAAAGTTAGTGCACTCCATAAAACTATTATAGGTTCTCCATCATCGAATCCTACAAGAAATTCAAGCCACACATCTTGGCACAAGAATCCAGTTGAGAAACGATCTGTGTCAGAAATTACAGCTGTCTCTAGGTTTGTAGATACAACCAAGAAGAACAAAATGCTTAAAGAAAATATTTTTGTTGAGAACAACGCAAGAGAGGCAAGCACTAGGCGGCTGTGGTTGTCAATCGCCCGAAGAACAGTTGAATGGTTTTCCAATAGAGAAAGAAAGGGTCAGCAGTCTCAAAACATACATCAAGAATTAGGTGTATAG 1269 0.4035 MNQCCVFLCLLLNVFVFHIKGQSTEEAPPRDAGNGFQPSLAVVIGILCIMFSLTFILLIYAKLCHRYHSAAQTDVENHPRLLQPRSRFSGSGIDKNIIESLPFFKFSRLRGTREGLECAVCLSKFEDIEILRLLPKCKHAFHINCIDHWLESHSSCPLCRQKVSAEDPTLFTYSNSLRFLSNPSEPREDSSIELFVQREETQEGGSSRFCVGSSFRKFEKGGNQDADSLIRKEAKYDLDYDGKLMHKHYHRIVVSDIIFKHRWSSVCSSDMMFLNLEMLNAMSSNRFDSMDSSNEHTSIVSEEFQNIKNVERKRLLESKVSALHKTIIGSPSSNPTRNSSHTSWHKNPVEKRSVSEITAVSRFVDTTKKNKMLKENIFVENNAREASTRRLWLSIARRTVEWFSNRERKGQQSQNIHQELGV* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00070 422 FunFam RING-H2 finger protein ATL43 93 167 - -
Pte7g00070 422 SUPERFAMILY RING/U-box 97 166 - -
Pte7g00070 422 Pfam Ring finger domain 117 160 IPR001841 -
Pte7g00070 422 MobiDBLite consensus disorder prediction 327 343 - -
Pte7g00070 422 SMART ring_2 118 159 IPR001841 -
Pte7g00070 422 CDD RING-H2_EL5-like 117 160 - -
Pte7g00070 422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 168 IPR013083 -
Pte7g00070 422 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 23 408 - -
Pte7g00070 422 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Pte7g00070 422 MobiDBLite consensus disorder prediction 327 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00070 Pte-Chr7 891535 892803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00070 1 423 C3H Transcription Factor Family AT4G28890 44.934 3.17e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00070 K10664 - qsa:O6P43_003989 458.759