Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00058 ATGCCCAACAAGCAATCAACAATGTTGGAGATGCCAAACTCAGAGACCGATAATAGTACCAATAACTGGGCTTCATCCTCATCCTCTTCTTACTTCTTACTGCTCCCCTCTATCTCTCCTCCTTCACCATCCACATCATCATCATCATCGTCAATACTTTCTGGTTCGGCTCAATCAGCACAACCGGACCCGGATCCCAATCCATTGCCGTCAGTAAAGAAGATGGATCCTATTGAACCGGGCCAGAAGAAACCCGCCAAGAGAGCTAGGGATCATAGTAAGCACCCCGTTTACAGAGGAGTGCGAATGAGGGCTTGGGGTAAGTGGGTCTCCGAAATCCGAGAGCCCCGGAAGAAGAATCGGATCTGGTTAGGCACCTATGCTACTCCAGAAATGGCCGCTCGGGCACATGATGTTGCTGCGATGAGTATCAAAGGCAACTCCACCGTACTCAACTTCCCCGAAATCGCCAGTTCATTGCCCCGACCCGCTTCCAACTCACCTCGAGATGTTCAAGCTGCAGCTGCAAAAGCAGCTTCCATGGAAATATTCATTCAACAAACAGCACCTTCATCTTCATGTCCGTTGTTGAAGCAGTCAACTTTCTCGTCTTCATTTGAGGTATCTTGCTCGGGCGACCCGTCGACCCCAGAAGAACTAGCTGAGATAGTGGAGTTGCCAAGCTTAGGAACGGGTTTTGAGTCGACCGGGTCGAGCAACGAATTCGTATTTGTCGACTCAGTAGATGGGTGGCTGTATCCTCCGCCATGGCATCACAGCATCGATAACTGCACTGAGGACTGTTATAGTTATTTCATCAGCGATCCTCTAATTAATACAAAAGCTGGAAACTGTGAAACCTTGTAG 867 0.4902 MPNKQSTMLEMPNSETDNSTNNWASSSSSSYFLLLPSISPPSPSTSSSSSSILSGSAQSAQPDPDPNPLPSVKKMDPIEPGQKKPAKRARDHSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTYATPEMAARAHDVAAMSIKGNSTVLNFPEIASSLPRPASNSPRDVQAAAAKAASMEIFIQQTAPSSSCPLLKQSTFSSSFEVSCSGDPSTPEELAEIVELPSLGTGFESTGSSNEFVFVDSVDGWLYPPPWHHSIDNCTEDCYSYFISDPLINTKAGNCETL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00058 288 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
Pte7g00058 288 MobiDBLite consensus disorder prediction 1 97 - -
Pte7g00058 288 SMART rav1_2 97 160 IPR001471 GO:0003700|GO:0006355
Pte7g00058 288 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 59 232 - -
Pte7g00058 288 Gene3D AP2/ERF domain 97 156 IPR036955 GO:0003700|GO:0006355
Pte7g00058 288 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Pte7g00058 288 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Pte7g00058 288 SUPERFAMILY DNA-binding domain 97 154 IPR016177 GO:0003677
Pte7g00058 288 ProSiteProfiles AP2/ERF domain profile. 97 154 IPR001471 GO:0003700|GO:0006355
Pte7g00058 288 CDD AP2 98 155 IPR001471 GO:0003700|GO:0006355
Pte7g00058 288 MobiDBLite consensus disorder prediction 1 62 - -
Pte7g00058 288 FunFam Ethylene-responsive transcription factor 2 96 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00058 Pte-Chr7 772565 773610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00058 83 274 AP2-EREBP Transcription Factor Family AT5G11590 58.763 6.20e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g00058 AP2 5.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00058 K09286 - qsa:O6P43_003984 297.36