Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00050 ATGAGTTCATCCGAAAGGCAAGAGTTGAAAGAAGACAAAGCAAGGGAGTTAACAACTTCCATGGCAATAATTTTCAGATGTGCTGATTGGATTGATATTTTGCTCATGTTAATGGGAGCTCTAGGAGCAATAGGAGATGGCATGTCAACAAATGTCCTGCTCATCTTTGCCAGCCGTATAATGAACAGCTTAGGTTCAGGTAAAGCTCAAGGGAGTAGTTCTGGAAATTCCATGGACGAGGTTGAAAAGTGCAGCTTATACTTTGTGTACTTGGGATTGGCAGCAATGGTTGTGGCTTTCATGGAAGGCTACTGTTGGAGCAAAACTAGTGAGCGACAAATTCTTAGGATTCGCTACAAGTATTTGGAAGCTGTTCTTAGACAAGAAGTTGGATTTTTTGATTCGCAAGAAGCAACTACTTCAGAAATTGTTAATAGCATATCAAAAGACTCTTCCCTCATCCAAGAAGTTCTCAGTGAAAAGGTTCCGCTATTTTTGATGCATTCTTCATCTTTTCTCTCTGGGATTGCATTCTCCACATACTTCTCATGGAGATTAGCCTTAGTGGCATACCCAACACTGGTTTTTCTGATAATACCTGGAATGATTTATGGCAAATACCTAGTCTATTTGTCAAAGAAGTCCCGCAAAGAGTATACCAAGGCAAATGCCATCGTTGAACAGGCCTTAAGCTCCATTAGAACTATTTATTCATTCACAGCTGAGAAGAGAATCATAGAGAAGTATTCAACAATACTAGATAAAACTTTAAGGCTCGGAATCAAGCAAGGTATAGCTAAGGGTCTGGCAATTGGAAGCACAGGTCTTTGCTTTGCTATATGGGCTTTTCTTGCTTGGTATGGCAGCCGTTTGGTGATGTACAAAGGTGAAAGTGGTGGAAGAATATATGCAGCTGGCATTGCCTTCATTATGAGTGGACAATCCCTAGGAGTGGTGCTTCCTGATCTAAAGTACTTAACAGAAGCATCTGTTGCTGCTAGGAGGATATTTGATAGGATTGACCGTATACCACTCATTGACAGTGAAGACACGAAAGGAATTGTCTTAGATGAAATCAGAGGCAAAATAGAATTTGAGCATGTCAACTTCTATTACCCTTCTCGTCCAGATGCAACCATTCTCAAAGACTTCAATCTCATTGTTGAATCAGGGAATACAGTTGCTCTTGTTGGTGCTAGTGGCAGTGGCAAATCCACTGCCATTGCATTGTTGCAGAGATTTTATGATGTGAGTGGTGGGGTTGTACGTATAGATGGTGTAGATATAAAGAGTCTGCAGCTGCAATGGATGAGGGGCAAAATGGGATTGGTCAGTCAGGATCATGCACTGTTTGCAACCAGTATAAAGGAGAATATAATGTTTGGGAAGCTTGGTGCAACTATGGATGATGTTGTGGCAGCAGCAACGGCTGCTAATGCTCATAATTTCATCAGGCAGCTTCCTGAAGGGTACGAGACTAAGATTGGTGAAAGAGGGTCACTTCTATCCGGTGGACAAAAACAAAGGATAGCCATTGCGAGAGCCATCATTAGAAACCCTGTGATTCTGCTTCTCGATGAAGCAACCAGTGCCCTTGACTCTGAATCAGAATCGAGTGTCCAAAATGCCCTTGATCAGGCCTCCATGGGAAGAACTACATTGGTTGTTGCCCACAAGCTCTCAACTATTCGAAATGCAGACCTCATAACGGTCATGAATGGTGGCAGTATCATTGAATTGGGTTCTCATAATGATCTTATCAATCGTCAAGATGGACATTATGCAAAACTTGCAACTTTACATCGACAAGGAGATTGTAATGGTCAAGAACAGAATATGGAATCACCATTCCCTTCAGCCTCAAGAAGCAGTGCTGGTCGGTTAAGCTCTGCAAGGTCAAGCCCTGCAACCTTTGCAAAGACACCTTTACATGACGGTCCTCCAGCACTAGTATCTCACTCTCCGCCATCTTTATCGCGCCTTCTCTCTCTGAATGTCTCTGAATGGAAGCAGAGCCTAATTGGATGCCTTTCAGCTGCAGCCTTTGGTTCAATCCAACCAATCTATGCCATAACCATCGGAGGAATGATTTCAGCATTTTTTGCACAAAGCCATGAGGATATGCGTCATAGGATTTATATCTATTCACTGATATTCTCTTCTCTTTCCTTGGCTTCTATCATTCTGAATCTTTCTCAGCACTACAATTTTGCATACATGGGTGAGAAGTTAACAAAAAGAATCAGATTGTGCATGCTGGAGAAGATTTTGACCTTTGAAGCGGCTTGGTTTGATGAGGAAAAAAACTCTAGCGGGGCCTTGTGTTCAAGACTGAGCAATGAGGCTTCTACGGTCAAGTCACTAGTAGTTGACCGGGTAAGCTTATTAGTTCAAACCACTTCTGCTGTGACTATTGCAATGGTCATGGGGCTTGTTGTTGCTTGGAGACTTGCTCTTGTTATGATCGCTGTACAGCCTCTCACCATTCTATGCTTTTATACAAGAAAAGTTCTACTGTCTACCCTCTCAGCTAAGTTTGTCAAGGCTCAAAATCATAGCACACAAATTGCAGTGGAGGCGGTCTATAATCACAGGATAGTGACTTCTTTCGGTAGTGTTGGAAAAGTGTTGGAACTTTTTGATGAGGCTCAGGATGAGCCACGAAAGGAGGCAAGGAAGAAATCTTGGTTAGCAGGTATTGGAATGGGTTCAGCTCAGTGCCTCACATTCATGTCATGGGCTTTGGATTTTTGGTATGGAGGTACATTGGTACAGAAGGGGGAGATATCGGCAGGGGACGTGTTCAAGACATTTTTTGTGTTGGTGAGCACAGGAAAGGTTATAGCTGAGGCAGGAAGCATGACCTCTGATCTTGCCAAAAGTTCAACAGCTATTACATCTGTTTTTGAAATTCTAGACCGCATGTCTCTAATTCCCAAAGCTGGGGATGGCTTCAGTGGCACTAAGCTGGAAAAACTAAGTGGAAAGGTAGAGTTGAAGAAAGTTGATTTTGCTTATCCAAGCCGACCACAGACATTAGTGTTACGACAATTCAGTTTGGAAGTGAAGACAGGCACAAGCGTTGGACTGGTAGGAAAAAGTGGATCAGGGAAATCCACAGTAATAGCATTACTTCAAAGGTTCTATGATGTTGAGAGAGGATCAATTAAGGTGGATGGAATAGACATAAGGGAACTTGACATTCAATGGTACAGGCAACACACAGCACTTGTTAGCCAAGAGCCAGTAATATATGCTCGTAGCATACGTGACAACATTTTGTTTGGCAAGTTTGATGCAGCCGAAAATGAAGTGATAGAGGCAGCTCGAGCTGCCAATGCACACGAGTTCATCTCGTCACTGAAAGAAGGGTATGAAACTGAATGTGGAGAAAGAGGGGTCCAATTATCGGGGGGACAAAAGCAAAGGATAGCCATTGCAAGAGCCATAATTCGGAACCCAACAATATTACTCCTGGATGAGGCAACAAGTGCATTGGATGTGCAATCAGAACAAGTTGTACAAGGAGCACTTGATCGAATTATGGTTGGAAGGACGACAATCGTTGTAGCCCATAGGCTCAACACAATAAAAGAGCTTGGAACCATTGCTTACGTTGCAGATGGTAAGGTTGTGGAGCGTGGAACCTATACCCAACTTCAGCACAAGAAGGGTGCTTTCTTTAAACTTGCTGCCCATCAAGCTTAG 3708 0.4291 MSSSERQELKEDKARELTTSMAIIFRCADWIDILLMLMGALGAIGDGMSTNVLLIFASRIMNSLGSGKAQGSSSGNSMDEVEKCSLYFVYLGLAAMVVAFMEGYCWSKTSERQILRIRYKYLEAVLRQEVGFFDSQEATTSEIVNSISKDSSLIQEVLSEKVPLFLMHSSSFLSGIAFSTYFSWRLALVAYPTLVFLIIPGMIYGKYLVYLSKKSRKEYTKANAIVEQALSSIRTIYSFTAEKRIIEKYSTILDKTLRLGIKQGIAKGLAIGSTGLCFAIWAFLAWYGSRLVMYKGESGGRIYAAGIAFIMSGQSLGVVLPDLKYLTEASVAARRIFDRIDRIPLIDSEDTKGIVLDEIRGKIEFEHVNFYYPSRPDATILKDFNLIVESGNTVALVGASGSGKSTAIALLQRFYDVSGGVVRIDGVDIKSLQLQWMRGKMGLVSQDHALFATSIKENIMFGKLGATMDDVVAAATAANAHNFIRQLPEGYETKIGERGSLLSGGQKQRIAIARAIIRNPVILLLDEATSALDSESESSVQNALDQASMGRTTLVVAHKLSTIRNADLITVMNGGSIIELGSHNDLINRQDGHYAKLATLHRQGDCNGQEQNMESPFPSASRSSAGRLSSARSSPATFAKTPLHDGPPALVSHSPPSLSRLLSLNVSEWKQSLIGCLSAAAFGSIQPIYAITIGGMISAFFAQSHEDMRHRIYIYSLIFSSLSLASIILNLSQHYNFAYMGEKLTKRIRLCMLEKILTFEAAWFDEEKNSSGALCSRLSNEASTVKSLVVDRVSLLVQTTSAVTIAMVMGLVVAWRLALVMIAVQPLTILCFYTRKVLLSTLSAKFVKAQNHSTQIAVEAVYNHRIVTSFGSVGKVLELFDEAQDEPRKEARKKSWLAGIGMGSAQCLTFMSWALDFWYGGTLVQKGEISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAITSVFEILDRMSLIPKAGDGFSGTKLEKLSGKVELKKVDFAYPSRPQTLVLRQFSLEVKTGTSVGLVGKSGSGKSTVIALLQRFYDVERGSIKVDGIDIRELDIQWYRQHTALVSQEPVIYARSIRDNILFGKFDAAENEVIEAARAANAHEFISSLKEGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQGALDRIMVGRTTIVVAHRLNTIKELGTIAYVADGKVVERGTYTQLQHKKGAFFKLAAHQA* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00050 1235 Pfam ABC transporter 381 530 IPR003439 GO:0005524
Pte7g00050 1235 SUPERFAMILY ABC transporter transmembrane region 31 347 IPR036640 GO:0005524|GO:0016020
Pte7g00050 1235 SMART AAA_5 390 592 IPR003593 GO:0016887
Pte7g00050 1235 SMART AAA_5 1024 1216 IPR003593 GO:0016887
Pte7g00050 1235 Pfam ABC transporter transmembrane region 38 300 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte7g00050 1235 Pfam ABC transporter transmembrane region 673 943 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte7g00050 1235 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 336 - -
Pte7g00050 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 673 960 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte7g00050 1235 Gene3D - 353 610 IPR027417 -
Pte7g00050 1235 FunFam ABC transporter B family member 4 353 609 - -
Pte7g00050 1235 Gene3D - 987 1235 IPR027417 -
Pte7g00050 1235 Gene3D ABC transporter type 1, transmembrane domain 24 907 IPR036640 GO:0005524|GO:0016020
Pte7g00050 1235 FunFam ABC multidrug transporter SitT 987 1235 - -
Pte7g00050 1235 PANTHER ABC TRANSPORTER B FAMILY 6 685 IPR039421 -
Pte7g00050 1235 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Pte7g00050 1235 MobiDBLite consensus disorder prediction 606 631 - -
Pte7g00050 1235 ProSitePatterns ABC transporters family signature. 1136 1150 IPR017871 GO:0005524|GO:0016887
Pte7g00050 1235 Pfam ABC transporter 1015 1164 IPR003439 GO:0005524
Pte7g00050 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Pte7g00050 1235 FunFam ABC transporter B family member 1 23 360 - -
Pte7g00050 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 599 IPR027417 -
Pte7g00050 1235 CDD ABC_6TM_Pgp_ABCB1_D2_like 662 978 - -
Pte7g00050 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 997 1233 IPR003439 GO:0005524
Pte7g00050 1235 SUPERFAMILY ABC transporter transmembrane region 660 973 IPR036640 GO:0005524|GO:0016020
Pte7g00050 1235 FunFam Putative ABC transporter B family member 8 644 982 - -
Pte7g00050 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 990 1234 IPR027417 -
Pte7g00050 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00050 Pte-Chr7 684383 690721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00050 24 1230 Calmodulin-binding Proteins AT2G36910 42.110 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00050 K05658 - qsa:O6P43_007868 1867.82