Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00046 ATGCCAACCTTGCATCTCCTTTTCTGCATATTACTTGCAGCTCTTGTTCTGCTTCAGAATCCAAGTGTAATACATTGCCATACCAAGCGATTGAGGCTGAGAAATTCTGCAGGGAAGGGACTCATCCAGACCAATATGACACGAACTCAGTTCTCAGAAGAGCAGTTCATGAAATGGATCGACTTTGTTGGAAGTCTCAAACACTCGGTTTTCAGAACAGCGAAGAACAAGCTCTTCCCTTCTTTCACTTTGACTGTAGACAAGAACCCAGCCCACGGAGACTTCACATCAATACAGGATGCAATTGATTCTCTGCCCTTCATTAATCTTATCAGAGTGGTCATCAAGGTCCATGCAGGAGTTTACACGGAAAAAGTAAATATACCTCCTTTAAAATCCTTCATAACAATGGAAGGAGCAGGGGCAGATAAAACAATTGTTCAATGGGGGGACACCGCCCAAACACCTGGCCCAAGAGGACAACCTTTGGGGACCTACGGTTCTGCAACTTTTGCTGTGAATTCACCTTACTTCATAGCCAAGAACATCACTTTCAAAAACACTACGCCAGTTCCACCTCCAGGGGCCGTTGGAAAACAGGCCGTGGCATTCAGAATTTCAGCTGATACAGCAACATTCTTGGGATGTAGTTTCTTAGGTGCACAGGATACACTTTACGATCATGTGGGTAGGCACTATTACAAAGACTGTTACATAGAAGGCTCTGTGGATTTCATATTTGGCAATGGCCTCTCTCTGTTTGAGGACTGTCACGTGCATGCCATAGCTCAAAACTTGGGGGCCCTAACTGCGCAAGGAAGAAGCAGTCTTTTGGAAGACACGGGCTTCTCATTTGTGCACTGTAAAGTCACGGGCTCAGGAGTACTCTACCTTGGAAGGGCTTGGGGTCCCTTTTCAAGAGTGGTCTTTGCCTATACTTACATGGACAATATCATCATTCCCAAAGGATGGTATAATTGGGGTGATCCAAACCGTGAAATGACTGTATTTTATGGACAATATAAATGCACAGGGCCAGGGGCAAGCTTTGCTGGAAGAGTGTCATGGTCTAGGGAGCTCACTGATGAGGAAGCTAAACCTTTTATTTCACTTAGCTTCATTGATGGTTCTGAGTGGATCAAGTTGTTCTGA 1152 0.4497 MPTLHLLFCILLAALVLLQNPSVIHCHTKRLRLRNSAGKGLIQTNMTRTQFSEEQFMKWIDFVGSLKHSVFRTAKNKLFPSFTLTVDKNPAHGDFTSIQDAIDSLPFINLIRVVIKVHAGVYTEKVNIPPLKSFITMEGAGADKTIVQWGDTAQTPGPRGQPLGTYGSATFAVNSPYFIAKNITFKNTTPVPPPGAVGKQAVAFRISADTATFLGCSFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNGLSLFEDCHVHAIAQNLGALTAQGRSSLLEDTGFSFVHCKVTGSGVLYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWSRELTDEEAKPFISLSFIDGSEWIKLF* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00046 383 Gene3D - 81 382 IPR012334 -
Pte7g00046 383 FunFam Pectinesterase 80 382 - -
Pte7g00046 383 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Pte7g00046 383 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 80 381 - -
Pte7g00046 383 Pfam Pectinesterase 91 376 IPR000070 GO:0030599|GO:0042545
Pte7g00046 383 SUPERFAMILY Pectin lyase-like 79 381 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00046 Pte-Chr7 631811 635065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00046 84 380 Carbohydrate Esterase AT5G47500 52.013 5.58e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00046 K01051 - qsa:O6P43_007857 679.093