Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00045 ATGTCAGGAGTGGAAGCTAGTCTTATCGGAGTCGTAGGCTGTTCAATCCACAAGATGTCGTGGCAGACTTACGTCGATGATCATCTCATGTGCGAAATTGAAGGCAACCATCTCTCCGCTGCTGCTATAATTGGCCATGACGGCAGCGTTTGGGCCCAGAGCACCACCTTCCCTCAATTGAAGACTGAGGAAATAAATGGAGTCATGAATGACTTCGCAGAACCTGGATCACTTGCTCCCACTGGACTGTATCTTGGTGGCACAAAATATATGGTGATCCAAGGAGAGCCAGGAGCTGTTATTCGAGGGAAAAAGGGTCCCGGGGGTGTTACTGTGAAGAAGACCAGTATGGCCTTAGTCATTGGGATCTATGATGAACCAATGACCCCTGGTCAGTGCAACATGATAGTTGAAAGGCTCGGTGATTATCTCGTTGAGCAGGGTCTCTAG 450 0.4889 MSGVEASLIGVVGCSIHKMSWQTYVDDHLMCEIEGNHLSAAAIIGHDGSVWAQSTTFPQLKTEEINGVMNDFAEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALVIGIYDEPMTPGQCNMIVERLGDYLVEQGL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00045 149 PANTHER PROFILIN 19 148 IPR005455 GO:0003779
Pte7g00045 149 SMART prof_2 19 149 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Profilin signature 118 131 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Profilin signature 58 78 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Profilin signature 131 148 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Profilin signature 39 48 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Profilin signature 82 96 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Pte7g00045 149 CDD PROF 20 148 IPR005455 GO:0003779
Pte7g00045 149 Gene3D Dynein light chain 2a, cytoplasmic 17 149 - -
Pte7g00045 149 Pfam Profilin 19 148 IPR005455 GO:0003779
Pte7g00045 149 SUPERFAMILY Profilin (actin-binding protein) 20 148 IPR036140 -
Pte7g00045 149 PRINTS Plant profilin signature 122 135 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Plant profilin signature 89 98 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Plant profilin signature 19 32 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Plant profilin signature 45 58 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Plant profilin signature 102 117 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Plant profilin signature 70 84 IPR005455 GO:0003779
Pte7g00045 149 PRINTS Plant profilin signature 135 148 IPR005455 GO:0003779
Pte7g00045 149 FunFam Profilin 19 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00045 Pte-Chr7 626169 629100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00045 19 150 Cytoskeleton Gene Families AT2G19760 77.273 1.16e-76 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00045 K05759 - qsu:111995052 254.218