Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00039 ATGATTAAGAGTAGTAGTAGTAATCTGAGCTCTGTGAGTAGTTCTGATCTCATTGATGCCAAGCTTGAAGAGCATCAGCTGTGCGCATCCAAGCAGTGCCCCGGTTGTGGACACAGGATGGAAGGAAAGCCGGACTGGGTTGGTCTACCAGCAGGTGTAAAATTTGATCCAACGGATCAAGAATTGATAGAACATCTTGAAGCAAAAGTTGAAGCAAAAGACTCTGAATCCCATCCTTTGATAGACGAATTCATCCCTACTATTGAAGGGGAAGACGGAATTTGTTATACACATCCAGAAAAACTTCCAGGAGTCACAAGAGATGGGTTGAGTAAGCACTTCTTCCACAGACCCTCCAAGGCTTACACCACTGGAACAAGAAAGAGAAGAAAAATCCAAAACGAATGTGACTTGCAAGGTGGAGAAACTCGATGGCACAAGACAGGTAAGACCAGGCCAGTCATGGTGAATGGAAAGCAAAAAGGGTGTAAGAAAATTCTAGTCCTCTACACCAACTTCGGGAAAAACAGAAAACCCGAGAAGACGAATTGGGTGATGCACCAGTACCATTTGGGAGTGCATGAAGAGGAGAAAGAAGGAGAGCTTGTGGTGTCCAAGATATTCTACCAGACTCAACCTAGACAATGTAACTGGTCTTCTGATAGAATTACAGCAACAAATATTACAAATGAATGCAGCAGTGATCCTAACAGCAGAAGAGATAGTGGGAGCGGGAGCACTTCTTCTTCTAAGGAAATAGTGCCCCAGAGAGATGAGATGTCTGCAATTGGGGTTCCTCCAATATCAAGTTATGGCGCTTTAGATATTCAACAGTTCAAATCTGACCATTTCAGCTTTGCACCATTCAGGAAAAGCTTCGATGAGGTGGGGATAGGCGAGACTTCAACGACAAGGGAAGTATCAGCATCAGGAACGTGTGAAGAGGTGCATGAACAGCATAGACCTCATCACGTGCCTCAAGAACACCATCAACAACAGCATCATCACCATCATATTGCATCAACAGCTTTCCATCACATGATCAGTAGACCTTCGCATCCCGTGTCAACAATCATTTCCCCTCCTACCCAGCTCCACCCTTCCTCCATTATCCTCGATGAGAGCTCTTACCATGTCCAAAGAATACTACTCCAAAATCAAAATTTTCAGCAGCAGCACCAACAACATCATAAATTGGGAGGAGGAAGGTCAGCAGCTGGTTTGGAAGAACTCATCATGGGCTGCACTTCTACTGATATAAAAGAGGAGAATTCCATCACAAATCCGCAAGAATCCGAGTGGTTGAAGTACTCTTCCTATTGGCCTGACCCTGACAACCCGGATCAGCATGGGCTGTAG 1359 0.4489 MIKSSSSNLSSVSSSDLIDAKLEEHQLCASKQCPGCGHRMEGKPDWVGLPAGVKFDPTDQELIEHLEAKVEAKDSESHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGVHEEEKEGELVVSKIFYQTQPRQCNWSSDRITATNITNECSSDPNSRRDSGSGSTSSSKEIVPQRDEMSAIGVPPISSYGALDIQQFKSDHFSFAPFRKSFDEVGIGETSTTREVSASGTCEEVHEQHRPHHVPQEHHQQQHHHHHIASTAFHHMISRPSHPVSTIISPPTQLHPSSIILDESSYHVQRILLQNQNFQQQHQQHHKLGGGRSAAGLEELIMGCTSTDIKEENSITNPQESEWLKYSSYWPDPDNPDQHGL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00039 452 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 386 IPR044799 GO:0003700
Pte7g00039 452 SUPERFAMILY NAC domain 44 210 IPR036093 GO:0003677|GO:0006355
Pte7g00039 452 ProSiteProfiles NAC domain profile. 49 210 IPR003441 GO:0003677|GO:0006355
Pte7g00039 452 Pfam No apical meristem (NAM) protein 50 191 IPR003441 GO:0003677|GO:0006355
Pte7g00039 452 FunFam NAC domain-containing protein 73 58 214 - -
Pte7g00039 452 MobiDBLite consensus disorder prediction 229 255 - -
Pte7g00039 452 MobiDBLite consensus disorder prediction 229 259 - -
Pte7g00039 452 Gene3D NAC domain 58 214 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00039 Pte-Chr7 593455 598546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00039 13 449 NAC Transcription Factor Family AT5G56620 53.611 2.74e-142 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte7g00039 NAM 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00039 - - qsu:112032553 682.559