Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00031 ATGATCCAAGGAGCTTCAATCCCTGGCAATGTGATCACAGATGTAAACCCCTTTCATTATCTGCCCTCTGATTTGCCTGATGGTATTTGTTTTTTCATTTGCTCAGAGGTTAGAAAAGATACAGAGTTTGGTTTCTGGAAGAACAAAGGTAAAGCGATAGAAGTACTCACAAATTTTGCTATTACTGGCTGGAAAACGACTTTGGAATTTTATGAGGGTCGGGATCCACATGTTTATAAAACCGATTGGGTCATGCTAGTGTACACAGTACATCTGGAGGGGCAAAGCGAAATTAGAACAAAGGGCGCCTACTGTTTGTGCAAAGTCTTTTGTGGAAATAGGCTGGTTGAGGAAAAGCAAAAGAAACCTGTTACTCTTGTTGATACTTGTGAAATTGACCTGGACTCAGCTGAATCTATTGATCCACACAGTAATAGAATCAGAGGGCAGAGATCTATAGCCGATAATGATTCCATGGTTACAAGACTGGTAAAATCTGGAAAGACAACGTTAGCAATTGGCAGGGGGAGGTCTGGCGAGCAGAGGCACAGTGTGGGTTTTCGCAGAGAGAATGAGCCTGAGCTCTGTTTCGTTTCGGGCAATTAG 606 0.4274 MIQGASIPGNVITDVNPFHYLPSDLPDGICFFICSEVRKDTEFGFWKNKGKAIEVLTNFAITGWKTTLEFYEGRDPHVYKTDWVMLVYTVHLEGQSEIRTKGAYCLCKVFCGNRLVEEKQKKPVTLVDTCEIDLDSAESIDPHSNRIRGQRSIADNDSMVTRLVKSGKTTLAIGRGRSGEQRHSVGFRRENEPELCFVSGN* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00031 201 ProSiteProfiles NAC domain profile. 1 112 IPR003441 GO:0003677|GO:0006355
Pte7g00031 201 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 133 - -
Pte7g00031 201 Pfam No apical meristem (NAM) protein 3 89 IPR003441 GO:0003677|GO:0006355
Pte7g00031 201 SUPERFAMILY NAC domain 2 111 IPR036093 GO:0003677|GO:0006355
Pte7g00031 201 Gene3D NAC domain 1 115 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00031 Pte-Chr7 535627 537301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00031 2 122 NAC Transcription Factor Family AT1G65910 31.655 2.29e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte7g00031 NAM 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00031 - - jre:108991691 131.724