Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00013 ATGGCGAGGATGAATAATGCAGATAGGAAAGGAGGTGCATTGGCAGTGGCCATAGAGAATAACAAGACAAGCCAGTACGCTCTGAAATGGGCAGTGGACAACATTGTCATCAAAGGTCAAACAATTACGCTCCTCCATGTGAGGCAGAAAGCAATTAGTTCCACTCCTAACCGATCGGGAAACCTTGGAGCGATTTCGGACGTTGGCGAATATGATGCCCCAGCACACCAGCAACAAATGGATAAGGAAGCCAAAGATTTGTTTGCTCCATTCCGTGTCTACTGTCAAAGAAAGAATGTATTGTGTAGCGAGTTTTTGGCAGAGGATACAGACATTGCAAATGCACTCACGGATTTTGTTCGCAAGAACTTAATTGAACAACTCGTACTTGGGGCGCCATCAAGGAGTGGCCTGGTTAGAAGATTCAGAACTAATGACATCCCAAGCGCGGTGTCGAAGGGAGCTGCAGATTTCTGCTCTGTGTACATCATTTCAAAGGGGAAGATGTCTTCGATGCGGCCTGCGACTACTCCGTGTCCTAAGCCTGTTAATCAATTGATAGATCAATATATATATATATATATATATATATATCACGACCCTCCTTCGATCAAATCAAGGATGGATTTATTAATTGTAATCAATCAATTATATATACATATGATCGTACGGAAATGCAGATCACCATTTACAACTAGCAGTAGATCTTCTCTCGACAGTTGCTATGAATTCTCAGCAACAGACAGTGACATGTCCTTTGTAAGCAATGGAAGGCCAGGGAGTGAGCGCATGTTCCCTTCATTCTCAGAAAATTCGGAAATGACTCCAAATCTCCTTTCAAACGGCTCAGAGTGTGATGCCATGAGCTTCGGTTCATCTTTCTCTGGTAACAAATCAATGGACATGTTACGCTTCTCATTAGCCTCCTACGGAACTGGGGTCTCATCATCATCTTGGTCTGCTCAGAACATGGATGATATGGAAGCCGAGATGAGGAGGCTAAGACTAGAACTCAAGCAAACAATGGAGTTGTACAGTTCAGCTTGCAAGGAAGCACTTACAGCTAAGCAAAAGGTAATGGAAGCGCAGCAATGGAAGTTAAAAGAACAAAGAAAATTGGAAAGTGCAGGACTAGTTGAGGAAGCGGCACCAGTACTTGCGGAGAAGGGGTTGGCAGAATTGGAGGCACGGAGAAGAACTAGCCAGCAATCTGAGCAGCGGAAGAAAGAGTCATTTAGCTGCAACGAGCAACTGAGATACAGGAGATATGCGATCGAGGAAATTGAAGAAGCTACCGAACACTTTAGTCAATCTCGCAAAATCGGTGAAGGTGGTTATGGCCCTGTATACAAGGGACACCTGGATCACACACCCGTTGCTATAAAAGTTTTACGTCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAACGAGAGGTTGAAGTCTTAAGCTGCATAAGACATCCAAACATGGTTCTTCTCCTTGGAGCATGTCCAGAATACGGTTGCTTAGTTTATGAGCACATGGAAAATGGAAGCCTAGAGGACCGCCTCTTAAGGCGTGGAAATACCCCAGTTCTTCCTTGGCCGGTAAGATTTCGAATTGCTGCAGAGATTGGGAGTAGCCTGCTTTTCCTTCATCAGACCAAGCCCGAACCAATTGTACATCGTGATCTCAAACCCGCCAACATATTGCTGGATCGCAATAATGTTAGCAAGATCAGTGATGTGGGCTTAGCTAGGCTCGTCCCTGCATCAGTAGCAGACAGTGTAACTCAGTACCGCATGACCTCAGCAGCTGGAACTTTCTGTTACATAGATCCAGAGTACCAGCAGACTGGCATGTTAGGGACCAAATCTGACATTTACTCTTTCGGGGTCATGCTGCTCCAGATAATAACATCCAAGCCACCCATGGGTCTAACATATCATGTAGAACGATCTATTGAGAATGGCACTTTCGCTGAAATGCTCGACCCAGCTGTTACTGACTGGCCAATCGAAGAAGCTCTACGTTTTGCCAACTTGGCCCTTCAATGTGCGCAACTAAGGCGAAAGGACAGACCAGACCTTGGGAAAGTTGTGTTGCCAGAGCTCAACAGATTGAGAACACTTGCTGAAGCCCAAGAAACAAATACAAATGTTTTGTTTGCTTATGGAATTGGGAGCTCTCAAGTCTCAATATCTACGACTAGTACAACTGGTCACACTGCAATAACTCAAGATGAGTTCAATGAGTCCCAATTGTCAGGATATTCTACCTCAAAGAGTCGTTCAAGCACATCATCTTCTATGGGAAGAATATATTAG 2307 0.4469 MARMNNADRKGGALAVAIENNKTSQYALKWAVDNIVIKGQTITLLHVRQKAISSTPNRSGNLGAISDVGEYDAPAHQQQMDKEAKDLFAPFRVYCQRKNVLCSEFLAEDTDIANALTDFVRKNLIEQLVLGAPSRSGLVRRFRTNDIPSAVSKGAADFCSVYIISKGKMSSMRPATTPCPKPVNQLIDQYIYIYIYIYHDPPSIKSRMDLLIVINQLYIHMIVRKCRSPFTTSSRSSLDSCYEFSATDSDMSFVSNGRPGSERMFPSFSENSEMTPNLLSNGSECDAMSFGSSFSGNKSMDMLRFSLASYGTGVSSSSWSAQNMDDMEAEMRRLRLELKQTMELYSSACKEALTAKQKVMEAQQWKLKEQRKLESAGLVEEAAPVLAEKGLAELEARRRTSQQSEQRKKESFSCNEQLRYRRYAIEEIEEATEHFSQSRKIGEGGYGPVYKGHLDHTPVAIKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMENGSLEDRLLRRGNTPVLPWPVRFRIAAEIGSSLLFLHQTKPEPIVHRDLKPANILLDRNNVSKISDVGLARLVPASVADSVTQYRMTSAAGTFCYIDPEYQQTGMLGTKSDIYSFGVMLLQIITSKPPMGLTYHVERSIENGTFAEMLDPAVTDWPIEEALRFANLALQCAQLRRKDRPDLGKVVLPELNRLRTLAEAQETNTNVLFAYGIGSSQVSISTTSTTGHTAITQDEFNESQLSGYSTSKSRSSTSSSMGRIY* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00013 768 CDD STK_N 15 167 - -
Pte7g00013 768 PANTHER OS02G0152300 PROTEIN 15 726 - -
Pte7g00013 768 Gene3D Transferase(Phosphotransferase) domain 1 508 719 - -
Pte7g00013 768 ProSiteProfiles Protein kinase domain profile. 435 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00013 768 MobiDBLite consensus disorder prediction 746 768 - -
Pte7g00013 768 FunFam U-box domain-containing protein 51 508 708 - -
Pte7g00013 768 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 143 - -
Pte7g00013 768 CDD STKc_IRAK 441 701 - -
Pte7g00013 768 Gene3D HUPs 13 164 IPR014729 -
Pte7g00013 768 Gene3D Phosphorylase Kinase; domain 1 413 507 - -
Pte7g00013 768 SUPERFAMILY Protein kinase-like (PK-like) 412 694 IPR011009 -
Pte7g00013 768 SMART serkin_6 435 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00013 768 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 406 507 - -
Pte7g00013 768 Pfam Protein kinase domain 436 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00013 768 Pfam Universal stress protein family 16 142 IPR006016 -
Pte7g00013 768 Coils Coil 324 344 - -
Pte7g00013 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00013 Pte-Chr7 298392 302578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00013 1 727 Receptor kinase-like Gene Family AT1G78940 53.455 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pte7g00013 Pkinase 8.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00013 - - qsa:O6P43_007802 849.736