Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02321 ATGGAACCCAATGAAAACCAACTGGGCTCCTACTACCCCCACCAACCACAGCAGCTCCAACCTCACCACCAACTTCATCAGCAGCGGCACCAGACTACAACAGCCAACGCCAACATCACGCCTTCCACCACTGCTTCACCCACCAATGGCCTTTTACCAAACGTAGAAGGGTCCCACACGGTATACCCTCATTCGGTTGCTTCTGCCGTGTCATCCCATCTAGAAACTGTCAAGCGAAAGAGAGGGAGACCTAGAAAGTACGGTACCCAAGAGCAAGCGTTAGCAGCAAAGAAAGCAGCTGGAGCTGCTGGGTCATCATCTTCTCATTCCTACTCTAAGGACAAGAAAGACCGTGCCTTAGCCGGTGGTTCTTCTGCTGATGCTTCTTTTATCTGGACTAACAAGAAAGTCCACTCATTTTCAGGACAAGGTTTCATCCCACACATCTTAAGTGTAGCGGCTGATGAGGATGTTGGCCAGAAAATTATGATGTTCATGCAACAAAGTAGATGTGAATTGTGTATTCTCTCTGCTTCTGGTTCGATCTCTAATGCTTCTCTTTGCCAATCAGCAACATCAGGAGGCAAAGTTACATACGAGGGTCATTTTGATATTATTTCGCTTTCCGGATCCTACATCCGTACTGAGCTTGGAGGCAGAACAGGTGGTCTTAGTGTATGCTTGTCTAGCACTGATGGCCAAATAATAGGAGGAGGAGTTGGTGGACCCTTGAAAGCTGCAGGGCCAGTGCAGGTTATTGTCGGTACTTTTTTTGTGGAGACGGAGAAGAATAGTGTTGTAAAAGGTGGCTCTACTGGAAGCAAACTCCCGTTACAAATCGAGGATGAATCAATCTCAAATGTAGGCCTCCACTCTGTAGTTGACTCTTCTGGTGCTGCGGGAAGAGGAAATGGAGATCATCAAGCCATCGGAGCCAGCCAGTACATGATTCAATCATGGAGCGTCCAGGTTACTCCAGGGCCCACTGATTGGAAAGACCATGCAGACGCACGGAATACAGCTGATTTTGAACTCTCAGGGAGAAGTCACGGAGCACAGGAATATCCAGAAAATGGGGACTATGACCAGATTCCAGATTAG 1101 0.4796 MEPNENQLGSYYPHQPQQLQPHHQLHQQRHQTTTANANITPSTTASPTNGLLPNVEGSHTVYPHSVASAVSSHLETVKRKRGRPRKYGTQEQALAAKKAAGAAGSSSSHSYSKDKKDRALAGGSSADASFIWTNKKVHSFSGQGFIPHILSVAADEDVGQKIMMFMQQSRCELCILSASGSISNASLCQSATSGGKVTYEGHFDIISLSGSYIRTELGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFFVETEKNSVVKGGSTGSKLPLQIEDESISNVGLHSVVDSSGAAGRGNGDHQAIGASQYMIQSWSVQVTPGPTDWKDHADARNTADFELSGRSHGAQEYPENGDYDQIPD* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02321 366 CDD DUF296 147 257 IPR005175 -
Pte6g02321 366 Pfam Plants and Prokaryotes Conserved (PCC) domain 147 257 IPR005175 -
Pte6g02321 366 MobiDBLite consensus disorder prediction 344 366 - -
Pte6g02321 366 MobiDBLite consensus disorder prediction 1 33 - -
Pte6g02321 366 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 258 - -
Pte6g02321 366 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 269 IPR039605 GO:0003680
Pte6g02321 366 MobiDBLite consensus disorder prediction 70 118 - -
Pte6g02321 366 ProSiteProfiles PPC domain profile profile. 141 280 IPR005175 -
Pte6g02321 366 Gene3D - 147 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02321 Pte-Chr6 38692509 38696768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02321 58 367 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 46.407 2.08e-68 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02321 - - qsa:O6P43_007692 409.453