Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte6g02319 | ATGGCAAGTGCTGGTCCCAACACAAATGGTTCCCAATTTTTCATCTGCACGGAGAAGACATTATGGCTTTATGGGAAGTATGTCGTACTTGGAAAAGCTGCTAATGGGCAGAGTGTGGTCAAGGCAATGGAGAAGGTGGGTTCTGCGTCTAGGGAAGACTTCAGAAGAACGATTGAATATTGTGGTCCCATTACTGCATATCCACAATCTTAA | 213 | 0.446 | MASAGPNTNGSQFFICTEKTLWLYGKYVVLGKAANGQSVVKAMEKVGSASREDFRRTIEYCGPITAYPQS* | 71 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte6g02319 | 70 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 62 | - | - | |
| Pte6g02319 | 70 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 70 | IPR002130 | GO:0000413|GO:0003755 | |
| Pte6g02319 | 70 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 1 | 54 | IPR002130 | GO:0000413|GO:0003755 | |
| Pte6g02319 | 70 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 25 | 40 | IPR002130 | GO:0000413|GO:0003755 | |
| Pte6g02319 | 70 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 12 | 24 | IPR002130 | GO:0000413|GO:0003755 | |
| Pte6g02319 | 70 | Gene3D | - | 1 | 66 | IPR029000 | - | |
| Pte6g02319 | 70 | SUPERFAMILY | Cyclophilin-like | 1 | 50 | IPR029000 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte6g02319 | Pte-Chr6 | 38684538 | 38684750 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte6g02319 | 1 | 46 | U-box Gene Family | AT5G67530 | 43.478 | 6.42e-07 | 42.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte6g02319 | K01802 | - | csin:114310748 | 87.0409 |