Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g02316 ATGAGGATCATGATTAAAGGTGGTGTTTGGAAGAACACCGAAGATGAAATCCTCAAGGCTGCTGTTATGAAATATGGCAAGAATCAGTGGGCTCGTATCTCTTCTCTTCTCGTTCGCAAATCTGCTAAGCAATGTAAAGCTCGTTGGTACGAGTGGCTCGACCCTTCCATTAAGAAGACTGAGTGGACTAGAGAAGAAGATGAGAAGCTCCTTCATCTTGCTAAACTTATGCCCACACAATGGAGGACAATAGCTCCAATTGTCGGGAGGACTCCTTCCCAATGTCTCGAGCGCTATGAGAAACTGCTCGATGCAGCTTGTGTTAAAGATGAGAAATATGAACCAGGTGATGACCCGCGGAAATTGCGTCCTGGGGAGATTGATCCAAACCCCGAATCTAAACCTGCTCGCCCTGATCCAGTGGATATGGATGAGGATGAGAAAGAAATGCTTTCTGAGGCAAGAGCTCGACTAGCTAACACAAAGGGTAAGAAGGCCAAAAGGAAAGCTAGAGAAAAACAGCTTGAAGAGGCCAGGAGGCTTGCATCCTTACAGAAAAAGAGAGAACTGAAGGCTGCGGGAATTGATATTAGGCACCGTAGGAGAAAGAGAAAGGGAATAGACTACAATGCGGAGATTCCTTTTGAGAAAAGGCCTCCTCCGGGGTTTTATGACACTGGAGATGAAGATAGGCCAGTGGAACATCCCAATTTCCCAACCACTATTGAAGATCTCGAAGGAAAAAGGAGGGCAGACTTGGAAGCACAGTTAAGAAAGCAAGATATTGCAAAGAACAAAATTGCGCAAAGGCAGGATGCCCCGTCAGCAATACTGCAGGCTAACAGACTGAATGACCCAGAAACGGTCAGGAAAAGAACAAAGCTGGTACTTCCTGCACCCCAAATATCTGACCATGAACTGGAGGAAATTGCAAAGATGGGTTATGCAAGTGATTTGCTTGCTGGGAATGAGGACCTTACAGAAGGTAGCGGTGTGACACGTGCTCTGCTTGCAAATTATGCACAAACATCTCAGCAAGGAATGACTCCTCTACGAACTCCACAAAGAACACCAGCTAGTAAGGGTGATGCGATTATGATGGAAGCTGAAAATCTTGCTAGGTTGAGAGAATCTCAAACCCCATTGTTGGGAGGGGATAATCCAGATTTGCATCCTTCAGATTTTTCGGGAGTAACACCCAAGAAAAGGGAGATTCAAACACCTCATCCAATGCAGACCCCTTCTGCTACACCTGGAGGTGCCGGGCTCACTCCTAAATCTGGCATGACACCCTCTAGGGATGGTTATTCATTTGGTGTGACCCCCAAGGGGACCCCTATAAGGGATGATCTTCATATTAATGAAGACATGGATATAAATGATAAAAGGTTCGAGCAACGAAACAAATCTGATCTAAAAAGAGACTTGCGAGCTGGTTTTAGCGGTCTCCCACAACCTAGAGAGGATCGGTATGAGTTTGTTGATAGGGGGCGAGATGCAGAAGATACTGAAGAGCCAGAGGAGAGGATTGAGGAAGATATGTCTGACAGACTGGCTAGAGAAAAGGCTGAAGAAGAAGCAAGGCAGCAGGCATTACTTAGAAAGAGATCTAAAGTGTTGCAGAGAGAACTTCCTAGGCCTCCTGCTGCCTCTTTGGAACTGATAAGAAATTCTCTGATGAGAGCTGATGGAGACAAGAGTTCCTTGGTTCCACCTACACCAATTGAGCTTGCAGATGAGCTTGTGAGGAAGGAGCTCTTAGTTTTACTTGAACATGATAATGCTAAGTATCCACTTGATGAGAAAGTCAGTAAAGAGAAAAAGAAAGGTGTGAAGCGCACAGCAAATGGTTTGATGGTGATACCCGTGATAGAGGATTTTGAAGAAGATGAGTTACAGAAAGCTGATCTGTTGATTAAGGAGGAGGTTCAGTATCTTCGTGTGGCAATGGGGCATGAAAGTGAATCCCTCGATGAGTTTATTGAAGCTCACAGAACTTGTCTCGGTGATCTGATGTATTTTCCAACTCGCGGTGCTTATGGTCTTTCAAGTGTTGCGGGAAATATGGAAAAGCTCAATGCATTGCAAAGTGAATATGAAAATGTGAAAAACAAATTTGATGACGTTAAGGATAAGGCACTGCGTCTTGAAAAGAAGGCCACAGTTCTCACACAGGGCTATGAGATGCGGGCAAAAAAGTCTCTTTGGCCCCAAATTGAGTCAACGTTCAAACAAATGGACACTGCTGCAACAGAATTTGAGTGCTTTCAAGCTCTGAAGAAGCAGGAGGAGCAAGCTGCATCTCACCGAATAAATAACATTTGGGAAGAACTTAAAAAACAAAAGGGACTTGAAAATATCTTACAAAAGAAGTATGGAAATCTATTGTCGGAACTTGAAAGTATTGAACAAGTAATAGAGCAGTATAGGAGAGAAGTGAAACATGAAGAACTGGAAGCACAGCATACATTGAGTCCTGGACATGTAGCACTTGCAAATGAGGCTGGAGAAAGATCTCAAGACAACCAAGGTGATGATGTGCAAGACAGTCTATCGGGCCAACAAGGAGATATGGATGTGGATAATCAGGAGGAGAAAGCACCGAGCAAAACCGTAGAATTAGTTGGTGATTCAGATGTCAAGGAAGGCAGCAGTACTGACATGGCAGTCGGCCAAGATGCTGCAGTCAGCGAAATTGTGGATGATGGCTTAGTTGATAATAATGTAAATGGCGGTGGTCTTAAGCGTGAGGATGAAGATGATGCAAAGGCTCGCCATATAATTGAGGAAGCTATAAACCCACAAGACAATGGTATGTAA 2820 0.4433 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDEKYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRHRRRKRKGIDYNAEIPFEKRPPPGFYDTGDEDRPVEHPNFPTTIEDLEGKRRADLEAQLRKQDIAKNKIAQRQDAPSAILQANRLNDPETVRKRTKLVLPAPQISDHELEEIAKMGYASDLLAGNEDLTEGSGVTRALLANYAQTSQQGMTPLRTPQRTPASKGDAIMMEAENLARLRESQTPLLGGDNPDLHPSDFSGVTPKKREIQTPHPMQTPSATPGGAGLTPKSGMTPSRDGYSFGVTPKGTPIRDDLHINEDMDINDKRFEQRNKSDLKRDLRAGFSGLPQPREDRYEFVDRGRDAEDTEEPEERIEEDMSDRLAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRADGDKSSLVPPTPIELADELVRKELLVLLEHDNAKYPLDEKVSKEKKKGVKRTANGLMVIPVIEDFEEDELQKADLLIKEEVQYLRVAMGHESESLDEFIEAHRTCLGDLMYFPTRGAYGLSSVAGNMEKLNALQSEYENVKNKFDDVKDKALRLEKKATVLTQGYEMRAKKSLWPQIESTFKQMDTAATEFECFQALKKQEEQAASHRINNIWEELKKQKGLENILQKKYGNLLSELESIEQVIEQYRREVKHEELEAQHTLSPGHVALANEAGERSQDNQGDDVQDSLSGQQGDMDVDNQEEKAPSKTVELVGDSDVKEGSSTDMAVGQDAAVSEIVDDGLVDNNVNGGGLKREDEDDAKARHIIEEAINPQDNGM* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g02316 939 Coils Coil 792 819 - -
Pte6g02316 939 Gene3D - 60 115 - -
Pte6g02316 939 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Pte6g02316 939 Coils Coil 167 187 - -
Pte6g02316 939 SMART sant 58 105 IPR001005 -
Pte6g02316 939 SMART sant 6 55 IPR001005 -
Pte6g02316 939 MobiDBLite consensus disorder prediction 495 516 - -
Pte6g02316 939 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Pte6g02316 939 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Pte6g02316 939 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Pte6g02316 939 FunFam CDC5 cell division cycle 5-like 5 59 - -
Pte6g02316 939 MobiDBLite consensus disorder prediction 406 420 - -
Pte6g02316 939 Pfam pre-mRNA splicing factor component 407 658 IPR021786 -
Pte6g02316 939 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 806 IPR047242 GO:0000398|GO:0000974
Pte6g02316 939 Coils Coil 515 535 - -
Pte6g02316 939 CDD SANT_CDC5_II 55 106 IPR047240 -
Pte6g02316 939 FunFam CDC5 cell division cycle 5-like 60 120 - -
Pte6g02316 939 MobiDBLite consensus disorder prediction 157 176 - -
Pte6g02316 939 Gene3D - 5 59 - -
Pte6g02316 939 MobiDBLite consensus disorder prediction 110 150 - -
Pte6g02316 939 Coils Coil 685 719 - -
Pte6g02316 939 MobiDBLite consensus disorder prediction 380 450 - -
Pte6g02316 939 CDD SANT 10 53 IPR001005 -
Pte6g02316 939 MobiDBLite consensus disorder prediction 859 873 - -
Pte6g02316 939 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Pte6g02316 939 Pfam Myb-like DNA-binding domain 10 70 - -
Pte6g02316 939 MobiDBLite consensus disorder prediction 835 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g02316 Pte-Chr6 38675273 38680065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g02316 1 834 MYB-Related Transcription Factor Family AT1G09770 72.792 0.0 1199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte6g02316 Myb_Cef 4.6e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g02316 K12860 - qsa:O6P43_011261 1312.75